Gene Psyc_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0645 
Symbol 
ID3514385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp765000 
End bp765902 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content42% 
IMG OID637669335 
ProductIS30 family transposase 
Protein accessionYP_263938 
Protein GI71065211 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.358598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.401127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAG TGACAGTTGA TGAAGTACGT CTTTATCAAA GAAACCAAAA AATATTTAGC 
ATCACCTGTA TGTGTCACGT ATTAGATGTC AAGCCATCAA GCTACTACAA CTGGATAAAT
CGTGGTATCA GTAATCAGCA GATTCGTCGC AATCAGTGTG AGTTGCTGGT TCGCGTGGCT
CATTATGAAA CTAAACAGCG CTATGGCTGT GAGCGCTTGC ATGCTCATCT TGCAGAGCAA
GGGCATCATA TCAGTCAATA CATGGTCAGA AGCATCAAAG AACAGTACGG TATTACTTGC
CGTCGTCACA AACGTTTTAA AATCACTACC AACTCTAATC ATAATAAGCT CGTATATCCA
AACCTGATCG ATCAGAAGTT TGATACCAAT CGTCCTAACG AGTCGTGGGT TAGTGACATC
ACTTATATCT GGACAAATGA AGGTTGGCTA TATTTGGCAG GCGTTAAAGA CATCTATACT
AAAGAGCTGG TCGGCTATGC CATTAATAAG CGCATGACCA CTGCTCTAGT ATGCCGTGCA
CTCAATATGG CAATTAAGAA TAAACGACCA AGCTCAAACC TGATTATTCA CTCTGACAGA
GGTAGTCAGT ACTGTAGCCA TGAGTACCAT AAGATCATTA AGCAGCATAA ATTTAAGGGC
TCGATGTCCA GACGTGGCAA TTGCTTTGAT AACGCGCCCA TAGAAAGCTT CTCGGGTGAG
GAGCACTGCT CCGCAAGGAA GAATGAGTTG GTGTATCACC AAGACTATAA AACAAGATTC
GAAGCCATTA GCGATATCAC TAAATATATT GAACTAGATT ACAACCAGAC TAGGATTCAA
AAGGGTTTAG GCTATAGAAC GCCAAGACAG ATGTGGTTTG ACTTTTATCG TCAGGCTGCG
TAA
 
Protein sequence
MPAVTVDEVR LYQRNQKIFS ITCMCHVLDV KPSSYYNWIN RGISNQQIRR NQCELLVRVA 
HYETKQRYGC ERLHAHLAEQ GHHISQYMVR SIKEQYGITC RRHKRFKITT NSNHNKLVYP
NLIDQKFDTN RPNESWVSDI TYIWTNEGWL YLAGVKDIYT KELVGYAINK RMTTALVCRA
LNMAIKNKRP SSNLIIHSDR GSQYCSHEYH KIIKQHKFKG SMSRRGNCFD NAPIESFSGE
EHCSARKNEL VYHQDYKTRF EAISDITKYI ELDYNQTRIQ KGLGYRTPRQ MWFDFYRQAA