Gene Psyc_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0540 
Symbol 
ID3513967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp632966 
End bp633772 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content46% 
IMG OID637669225 
ProducttRNA/rRNA methyltransferase 
Protein accessionYP_263835 
Protein GI71065108 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCAA ATCCCACCGA GCTTATTACC TCAGATAAGA ATACAACGGT CAAGCTCGTA 
AAGTCACTAT TGACGCAAGC TCGCCAGCGT AAGAAACACG GTCTAACCGT CATTGAAGGC
GTCCATCTTA TCGATGCCGC TCTTCGTAGC GACTATCCAT TTGATCAAAT ATTGGTTTCT
GAATCTACAC ATAAGAACCC TGAAGTTCAG CAGATTCTAA CCCGCCTGCC CACTTATACG
CCTATTTTGA CCTTGGCAGA TGCACTATAT GAAAGCATTC GTAGTTTAGG CACTGGGATT
GATATTATGG CAATGATTAA AGTGCCGGCG CCAAGCTTGT CGATGATTAA TGAGGACTGC
TTGATTCTTA ACGACGTGCA AGACAGTGGC AATGTCGGCA CCTTACTCCG TACTGCAGCC
GCTGTTGGTA TCAAAAACAT CCTCTGCACC AGTGCTACCG CTCAAGCGTG GTCACCGAAG
ACATTAAGGG CAGGCATGGG TGCGCAGTTT GCTTTGAATA TATATGAGGG GTTGAGTGTA
CAAGAAGTTT TAGACCATGT AGAAACCCCT CTATTTGCCA CCAGCTCGCA TACGGATACC
GTCATTTATC AACATGATCT AAAATCACCC ATCGCTTGGA TTATGGGACA TGAAGGTCAA
GGCGTTTGTG ATGAGTTGAT GCAGTGTGCC ACACCTATCG CGTTACCGCA GCCTAATGGG
CAAGAAAGCC TCAATGTCGC GATTGCAGGC TCGCTATGTT TGTATGAGAC GTTACGTCAA
AGAAATTACG CTTCAAACTT GGTTTAA
 
Protein sequence
MVANPTELIT SDKNTTVKLV KSLLTQARQR KKHGLTVIEG VHLIDAALRS DYPFDQILVS 
ESTHKNPEVQ QILTRLPTYT PILTLADALY ESIRSLGTGI DIMAMIKVPA PSLSMINEDC
LILNDVQDSG NVGTLLRTAA AVGIKNILCT SATAQAWSPK TLRAGMGAQF ALNIYEGLSV
QEVLDHVETP LFATSSHTDT VIYQHDLKSP IAWIMGHEGQ GVCDELMQCA TPIALPQPNG
QESLNVAIAG SLCLYETLRQ RNYASNLV