Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0487 |
Symbol | |
ID | 3514286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 593525 |
End bp | 595111 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669174 |
Product | RNAse G |
Protein accession | YP_263784 |
Protein GI | 71065057 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.258598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0128564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGAAG AGCTGCTGAT TAATATTAGT CCCATGGAAT CCCGTGTCGC CGTATTAGAT AACGGTATCT TGGGCGAGAT TTATATTGAG CGTCATCATA AGCTGGGTTT GGTTGGTAAT ATTTACTTGG GCACAGTGGT GCGTGTTCTG CCGGGTATGC AAGCAGCCTT TGTCGATATT GGTCAATCAC GTACCGCATT CTTACACGTT AATGATATGC AGCGCGAACC ACGTCCAGTC GCAAAAAGCA GCAAGATTGA AAAGACTGAT GATGAGCGCA CAATTATAGA GGCGACTGCT GATGATCTAG CCGTCACGCC GCCTGTAGTA AGTACGCAAA GTACAGAAGC CGTACTGATT TCGAAAACCC TTATCCAGCA TCGTCTGCAT GAAAGCCAAC GTATTTTGGT ACAAGTGACC AAAGATCAGC TGGGCAGTAA AGGCGCGCGC TTAACCACCA ATATATCGCT ACCATCACGC TATCTGGTCT ATTTGCCATC GAGTGATCAT ATCGGCATCT CGCAGCGTAT TGATGGTGAA GATGAGCGTA CTCGCCTCAA GACTGAGCTG AATAGTCTTA TGCAAACCGT CAATCTTAAA GGTGGACTGA TTGCGCGTAC GGCAGCTGAA CGGGTACCTG TCGATAAGCT CGAAGAAGAT ATTTACTATC TTTTGCAATT ATGGCGGACG ATTTGTGCCC GTCACCAAGA GATGAAACAA CATCAAAGCT CTGAGCTTAT TTATCAAGAA TTGTCACTAC CGCTACGCTC TATTCGTGAT TTGGTACATG CCGATACCGA AAAAGTGATT ATTGATAATG CGCAGATATA TGAGCAGGTT AGATACTTTG CCAAAGAATT TGTCCCTTTT GTTTATGATA GAATTGTGCA TTACACAGCT GAGCAGTCGC TATTTGATGT TCACCGTGTC GAAGATGATT TACGTGATGC GCTCAAACGC CGCGTTGATT TAAAGTCTGG TGGCTATCTG ATTATTGATC AAACCGAAGC GATGACAACT ATAGATGTTA ATACTGGCTC ATTTGTTGGT GGACGTTCAC TAGAAGATAC CGTCTATAAG ACTAATCTAG AAGCCACGCA CGCGATTGCC CGTCAGCTGC GCCTGCGTAA TCTGGGTGGT ATCATCATCT TAGACTTTAT TGACATGCTT GAGCAGCAGC ATAAAGATGA TATCCTTGAG AGCTTGCAGT CACAGCTGGT ACAAGATTAT GCCAAAACCA AAATCACCCA AGTCAGTGAG CTTGGTTTGG TTGAGATGAC TCGTAAGCGT ACCCGTGAGT CGCTTGGGCA GCAGCTATGT GAGCCGTGCT CGACCTGTCA AGGACGTGGT TTTGTCAAAA CAGCTGAAAC CGTCTGCTTT GAGATATTCC GTGAAATTAT GCGTTGCGCT CGTACTTACA ACTCTCCCAA AAAGTTTACC GTTGTCGCCC ATGCAGCTGT GATTGATTTA TTACTGACTT CAGAGTCGGA TACCGTAGCA GATTTAGAGT ATCTACTCGG TAGAGTGATT ACCTTTGATG TCGAAAATTT ATATACCCAA GAGCAATATG ATATTGTGTT GGACTGA
|
Protein sequence | MSEELLINIS PMESRVAVLD NGILGEIYIE RHHKLGLVGN IYLGTVVRVL PGMQAAFVDI GQSRTAFLHV NDMQREPRPV AKSSKIEKTD DERTIIEATA DDLAVTPPVV STQSTEAVLI SKTLIQHRLH ESQRILVQVT KDQLGSKGAR LTTNISLPSR YLVYLPSSDH IGISQRIDGE DERTRLKTEL NSLMQTVNLK GGLIARTAAE RVPVDKLEED IYYLLQLWRT ICARHQEMKQ HQSSELIYQE LSLPLRSIRD LVHADTEKVI IDNAQIYEQV RYFAKEFVPF VYDRIVHYTA EQSLFDVHRV EDDLRDALKR RVDLKSGGYL IIDQTEAMTT IDVNTGSFVG GRSLEDTVYK TNLEATHAIA RQLRLRNLGG IIILDFIDML EQQHKDDILE SLQSQLVQDY AKTKITQVSE LGLVEMTRKR TRESLGQQLC EPCSTCQGRG FVKTAETVCF EIFREIMRCA RTYNSPKKFT VVAHAAVIDL LLTSESDTVA DLEYLLGRVI TFDVENLYTQ EQYDIVLD
|
| |