Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0424 |
Symbol | |
ID | 3515076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 528255 |
End bp | 531563 |
Gene Length | 3309 bp |
Protein Length | 1102 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637669109 |
Product | type I restriction enzyme, R subunit |
Protein accession | YP_263721 |
Protein GI | 71064994 |
COG category | [V] Defense mechanisms |
COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAACG CGCACAACGT CACTTATGAA TCTGTCTTTC AAGCCGATAT CGTCAGCCAG ATGCAAGCGC AAGGCTGGCA GTTGGGTCAT GCCAGTGGCT ATCAGGCAGA GACTGCGCTA TATGAGCAAG ACGTGCTGGA CTTTGTACAG AGCACCCAGC CGCAGGAATG GGAAAAGTTT TGCCGCACCT TTCCTATCGA CTCTGAGCGT CATTTTATCA CCGCATTAGT CAAGCAGCTT AATAAAGCGG ATGAGCACTC AACCGATAGA GCCTCGCGCA CTTATGGCAC CTTGGGTGTA TTACGTCATG GCCTTAAGAT TCGTAACGCG CGTTTCTCAT TATGCCAGTT TAAGCCTGAG CACAGCCTTA ACCCTGAGAC CATGACACGC TATGAGGCCA ATATTTGCCG TGTTGTCTCT GAGGTGATCT ATAGCCCTCA TGTCAGTCTT AAAGATAGCC CAAAAGACAA AACAGACGGT AAGGTCGCTA AGCGTAACCG TATCGACATC GTACTATTCG TGAATGGCTT GCCTGTCACA ACGATGGAGC TAAAGTCTGA GTTTAAACAA GCGGTACAAA ATGCTATTAC TCAATATAAG AAAACACGCC TGCCTAAAGA CCCTGATACT AAGAAACCTG AGCCGCTACT AACGTTTAAG CGCGGCGCAT TGGTGCACTT TGCTGTCAGT CAGTATGAAG TCTATATGAC AACGAAGCTG GCAGGGGATA GCACCTATTT CTTACCGTTT AATAAAGGCA CAGAGCATGG CGGTGCGGGT AATGATACGC CTAGTGATAG CAGCCGCTAT GCCACCGATT ATCTATGGAA TGAAGTACTT ACGCCAGAGA ACTTACTCTC GATCCTTGGG CATTTTATGC ACTTGCAGAT CGACGAGGAA GAAGACGCAA TCGGTCGCAA GTCCAAAAAA GAGATATTGA TGTTCCCGCG TTATCATCAG TGGGATGTGG TGACCAAATT GGTTAATGCT GCCGTGACTG AGGGTGCTGG TCAAAAGTAT CTGATTCAGC ATAGTGCTGG TTCAGGTAAG TCTAACTCTA TTGCATGGAC AGCGCATCAG CTCTCAACCT TGTATAACGA TCAAGGCGAT AAACAGTTTC ACTCTGTCAT TGTCATCACC GATCGCACGA TACTTGATGA CCAGCTACAA GAAACCATCT ATCAGTTTGA ACATGCTGAT GGTGTGGTCG GCAAGATCAA TAGAAAAGAA GGTGACGGCT CAAAATCTGA AAAACTTGCC GAAGCATTAG TGAACTCGCA GCCGATCATC ATTGTCACTA TTCAAACCTT TCCGTTTGTG CTTAAGGCGA TTGAAGATTC AAGTGTGCTC AAGTCGCGCC GCTATGCCAT CATCGCTGAT GAAGCACATT CATCACAGAC AGGCTCTACG GCTCGCCAGC TTAAAGAAGT GTTGGTCTCA GGTGATATAG AGAGTAATAC AGACGATGAC AAGCCGCTAT CTAGCGAAGA TAGCCTTGAT TTCATACTGG ATGCCACGCT TGCCGCGCGC CGTAGTAGTC CTAACCTAAG CTACTATGCC TTTACCGCCA CGCCTAAGCC AAAAACCATT GAGCTATTTG GGCGTCTGCC TAATCCTGAC TTGCCAGCAT CGAAAGATAA CTTACCAGCC GCTTATCATG TCTATTCCAT GCGCCAAGCC ATTGAAGAGG GCTTTATCTT AGATGTGCTA AAAAACTACA CCAACTACAA AGTGGTCTAT CAGCTTAAGC AAAAGCTGGC CGCCGCTGAT GATGAAGTCG ATGCTCGCCG CGCCAAGATT AAGCTCAATA GCTGGGTACG CTTGCATGAA CACAATATCG CCCAAAAAGT AAAAATCATC ATTGAGCACT TTAATGACAA CATCAAAGGT TTACTTGGCG GACAAGCCAA AGCCATGGTG GTGACGGGTT CACGTAAAGA AGCGGTACGC TATAAGATAG CCTTTGATAA CTATATCGCT GATTACGGTT ACAGAAATAT CAATGCTATG GTTGCGTTCT CAGGTGAAGT CACCTTTAAC GACAATGATC CTGATAGCGG CGCACTTATC GGTGAGAAGT TCACTGAACA CAATATGAAC ATCGGGCTAA AAGGCCGCGA TCTACGTAAA GCGTTTGATA GTGATGACTA TCAGGTGATG TTGGTGGCTA ATAAATTCCA GACAGGCTTT GACCAGCCTA AACTATGTGC CATGTATGTT GATAAGAAGC TGACAGGCGT GGATTGCGTG CAGACACTCT CACGACTGAA CCGTACCTAT AAGGGCAAAG CAGAGAGTGG CACGTTTGTG CTCGACTTCT TTAATGATCC TGAGGATATT CTTGAAGCCT TCCAGCCGTA CTATGAGACC GCACACCTAG CAGATGTATC TGACCCTGAT CAGGTGTTTG ACCTTTATGA GAAGCTGCGC GTTAGTGGTA TCTTCACTAA GAACGAAGTC GAGCAGTTTG TTGAAGCGTT CTATAGTAAG AATAAGTCTA ATGCCGCCAT TAGCAATATC TGCAAGCCAG CGGTCGAGCG TTGGCAGAAG CAATATCATA AAGCGCGTAC AAAAGCACAG CATGCTAAAA CGATGCTTGA GCGCACCAAA GCAACGGGCG ATGTGGTACT GATGACCAAT GCTGAAAACG ACTACAAAGG CTTTAAGACA GATCAAGATG CGCTGGAAAT CTTTAAAAAG GACTTGGGTA CATTCACCCG TCAATACGAG TTTATGTCGC AAATCGTTGA CTATGATTCT AAAGACTTAG AGAAGCTGAG CCTATACGCG CGTAACCTAC AGCCGTTACT GCGTGAAAGC CTAGATAATG AAGAGGATGT TGATCTAAGT AATATCGTGA TGAGCCATTA CCGCGTCTCA ATTCTCCATC AGCAGGACTT GAAACTACAA GAGGGCAAAT CTGAATATCA ATTAGATGGT GGCAGCGGTG CAGGTACGGC AACCCCTAAA GATATAAAAG AAGCGTTTTT ATCGCAGATC ATTGAGCGCT TGAATGAGGT GTTTGTAACG GACAATCTCA CAGATAAAGA TATGCTTAAC TATGCACACA CTTTACGTGA CAAGCTATCT GAAAATACTA TCGTAATGAC TCAAATTGCT AGTAACCCAA AGGCGCAAGC ACTGCTAGGT GATTTTCCAA ACGCTCTAGA TGATGCTGTT ATAAGTAGCG GTGCGGCGCA TCAAGAACAG ATGATACAGT TACTTTCAGA TCCCGCAAAA ATGACTGCAA TCGGTAGAGT GGTGTATGAC ATGTTATGTG TGAACAGTGA AAAAGCGAAA TACATCTAA
|
Protein sequence | MANAHNVTYE SVFQADIVSQ MQAQGWQLGH ASGYQAETAL YEQDVLDFVQ STQPQEWEKF CRTFPIDSER HFITALVKQL NKADEHSTDR ASRTYGTLGV LRHGLKIRNA RFSLCQFKPE HSLNPETMTR YEANICRVVS EVIYSPHVSL KDSPKDKTDG KVAKRNRIDI VLFVNGLPVT TMELKSEFKQ AVQNAITQYK KTRLPKDPDT KKPEPLLTFK RGALVHFAVS QYEVYMTTKL AGDSTYFLPF NKGTEHGGAG NDTPSDSSRY ATDYLWNEVL TPENLLSILG HFMHLQIDEE EDAIGRKSKK EILMFPRYHQ WDVVTKLVNA AVTEGAGQKY LIQHSAGSGK SNSIAWTAHQ LSTLYNDQGD KQFHSVIVIT DRTILDDQLQ ETIYQFEHAD GVVGKINRKE GDGSKSEKLA EALVNSQPII IVTIQTFPFV LKAIEDSSVL KSRRYAIIAD EAHSSQTGST ARQLKEVLVS GDIESNTDDD KPLSSEDSLD FILDATLAAR RSSPNLSYYA FTATPKPKTI ELFGRLPNPD LPASKDNLPA AYHVYSMRQA IEEGFILDVL KNYTNYKVVY QLKQKLAAAD DEVDARRAKI KLNSWVRLHE HNIAQKVKII IEHFNDNIKG LLGGQAKAMV VTGSRKEAVR YKIAFDNYIA DYGYRNINAM VAFSGEVTFN DNDPDSGALI GEKFTEHNMN IGLKGRDLRK AFDSDDYQVM LVANKFQTGF DQPKLCAMYV DKKLTGVDCV QTLSRLNRTY KGKAESGTFV LDFFNDPEDI LEAFQPYYET AHLADVSDPD QVFDLYEKLR VSGIFTKNEV EQFVEAFYSK NKSNAAISNI CKPAVERWQK QYHKARTKAQ HAKTMLERTK ATGDVVLMTN AENDYKGFKT DQDALEIFKK DLGTFTRQYE FMSQIVDYDS KDLEKLSLYA RNLQPLLRES LDNEEDVDLS NIVMSHYRVS ILHQQDLKLQ EGKSEYQLDG GSGAGTATPK DIKEAFLSQI IERLNEVFVT DNLTDKDMLN YAHTLRDKLS ENTIVMTQIA SNPKAQALLG DFPNALDDAV ISSGAAHQEQ MIQLLSDPAK MTAIGRVVYD MLCVNSEKAK YI
|
| |