| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0338 |
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| Symbol | oprF |
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| ID | 3515055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 417594 |
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| End bp | 418778 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637669025 |
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| Product | outer membrane protein |
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| Protein accession | YP_263641 |
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| Protein GI | 71064914 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000725554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAA ATAAAATTGC TTTGGCTTTG TTTGCCATCA CCGCAGCCCC ACTAGCAGCT
AATGCTGGCG TAACTATCAG CCCATTACTA CTTGGTTATC ACTACAGCGA AGGCGCTGAT
GATGAGCAAG TTGAAACTAC GAGCCCTGCT GGTGTTGGCG ATAGTGGTTT CTATAAAGAA
AATGGATTAT ATACTGGTGC CGCACTAGGT ATCGAATTGA CTCCTTCTAC CCAGTTTCAA
GTAGAGTATG GTGTATCAAA TACTGATGGT GTAGATCCAG CATCAACTGA CAGCTTCGAT
GCTGAACAAG AAATGATCTC TGGTAACTTC TTGATTGGTA CTGAGCAATT CACTGGTTAC
ACTGATAATA AGCTTAAGCC ATATGTATTG GTTGGTGCTG GCCAATCTAA AATTAAGATT
GAAAATGCAG CGGGTACTGA AGTTGCCGAA ACTAAAGATA CTATCGGTAA CCTAGGTCTA
GGTGCTATGT ATCGTATCAA TGATGCGCTA AGCCTACGTG GTGAAGCTCG TGCGATTCAT
AACTTTGATA ACAACTGGTG GGAAGGCATG GCTTTGGCCG GCCTAGAAGT AGTCCTTGGT
GGTCACTTAG CACCTGCAGT AGCAGTTCCA CCAATGCAAG AGCCTGACGT TCAGACTCCA
CCAATCGTTA TTGTAGAATC TGATCTTGAT TCAGACGGCG ATGGCGTACT TGATAGCATC
GATGCTTGCC CAGGCACTCC AATGAATGTG GTTGTAGATG CGCGCGGTTG CCCAGTACCA
GTAGATATTA CTGATGAGCT AAAAATGGAA CTACGTGTAT TCTTTGATAA CGACAAGTCA
GCTATCAAAA CTCAGTACAA ACCTGAAATC GCTAAAGTAG CAGAGAAGAT GCGTGAGTAT
CCTAACTCTA CTGCTCGTGT TGAAGGTCAT GCTTCTAAAA CTGGTCCATC AGCACGTTAT
AACCAACGTC TGTCTGAAGC CCGTGCTGTT GCTGTGAAAT CTATGTTGAC TAACGAATTT
GGTATTGCAC CAAACCGTCT ATCAACCGTT GGTTATGGTT ATGACCAACC AATCGCTGAC
AACAACACTG AAGAAGGTCG TGCTATGAAC CGTCGCGTTT ATGCCATCAT CACTGGTGAC
AAAACGATGA CTGTTGAACA AACTAAAGAT ATGGTTGTTC AATAA
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| Protein sequence | MKLNKIALAL FAITAAPLAA NAGVTISPLL LGYHYSEGAD DEQVETTSPA GVGDSGFYKE
NGLYTGAALG IELTPSTQFQ VEYGVSNTDG VDPASTDSFD AEQEMISGNF LIGTEQFTGY
TDNKLKPYVL VGAGQSKIKI ENAAGTEVAE TKDTIGNLGL GAMYRINDAL SLRGEARAIH
NFDNNWWEGM ALAGLEVVLG GHLAPAVAVP PMQEPDVQTP PIVIVESDLD SDGDGVLDSI
DACPGTPMNV VVDARGCPVP VDITDELKME LRVFFDNDKS AIKTQYKPEI AKVAEKMREY
PNSTARVEGH ASKTGPSARY NQRLSEARAV AVKSMLTNEF GIAPNRLSTV GYGYDQPIAD
NNTEEGRAMN RRVYAIITGD KTMTVEQTKD MVVQ
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