Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0290 |
Symbol | glyA |
ID | 3514184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 355846 |
End bp | 357102 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637668977 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_263594 |
Protein GI | 71064867 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAG ATATTTCTAT CAAAGATTTT GATCCAGTAC TTGCTAAAGC CATGGCTGCT GAAAGCGTGC GTCAAGAGAA CCATATTGAG CTTATCGCTT CAGAAAACTA CTGCTCACAA GCTGTGATGG AAGCACAAGG TACTGATTTG ACCAACAAAT ACGCTGAAGG CTATCCTGGT AAGCGTTATT ATGGTGGTTG TGAGCACGTT GACGTCGTTG AGCAATTGGC AATCGACCGT GCAAAAGAAT TGTTTGGTGC AGAATATGTG AACGTACAGC CACATTCTGG TAGCCAAGCA AACTCTGCTG TGTTCTTAGC ACTGCTTGAA GCTAATGATA CGGTACTAGG CATGAGCTTA GATGCTGGTG GTCACTTGAC TCATGGCGCG CACATCAACT TTTCAGGTCT AAACTATAAT GCAGTACAGT ATGGTTTGGT CGAAGGCACT GGTCTTATCG ATTATGACCA AGTTGAGAGC TTGGCAAAAG AGCATAAGCC AAAAATGATC ATCGCTGGTT TCTCAGCATA CTCACAAGTC GTTGATTGGG CGCGTTTCCG CGAAATCGCT GACGAAGTGG GCGCTTATTT GCTCGTCGAT ATGGCACACG TTGCTGGTCT TATCGCTGGT GGCGTTTACC CAAGCCCAGT ACCATTTGCT GATGTGGTTA CGACGACAAC GCACAAAACT CTACGTGGCC CACGTTCAGG TATGATTTTG GCTCGTGATG AGAAACTTGC CAAAAAACTA AACTCTGCTG TCTTCCCAGG CAATCAAGGT GGCCCGTTGA TGCATGTTAT CGCGGCCAAA GCGATTTGCT TTAAAGAAGC CTTAGAAAAT AACTTCAAAA CCTATCAGCA GCAAGTGGTG AAAAATGCCC AAGCGATGGC AAAAGTCATC CAAGAGCGCG GCTATGAAAT CATCTCTGGT GGCACTGAAA ACCATCTAAT GCTGATCAGC CTAGTGAAGC AAGAAATGAC CGGTAAAGAA GCGGATAAAT GGTTGGGTGA TGCGCATATC ACTGTGAATA AAAACGCCGT GCCAAACGAT CCTAAATCTC CATTCGTAAC CTCTGGTATC CGTATTGGTA CACCAGCGAT TACGACTCGC GGCTTCAATG AAGCGCAAGC AGGTGCTTTG GCAGGTTGGA TTTGTGACGT GTTAGACAGC CGTGGCGATG AAGCAGCAAC CGCTGAAGTG CGTAGCAAAG TAGAAGCAAT CTGCAAAGAG CTTCCTGTTT ATGCTAAAAA CCAGTAA
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Protein sequence | MFKDISIKDF DPVLAKAMAA ESVRQENHIE LIASENYCSQ AVMEAQGTDL TNKYAEGYPG KRYYGGCEHV DVVEQLAIDR AKELFGAEYV NVQPHSGSQA NSAVFLALLE ANDTVLGMSL DAGGHLTHGA HINFSGLNYN AVQYGLVEGT GLIDYDQVES LAKEHKPKMI IAGFSAYSQV VDWARFREIA DEVGAYLLVD MAHVAGLIAG GVYPSPVPFA DVVTTTTHKT LRGPRSGMIL ARDEKLAKKL NSAVFPGNQG GPLMHVIAAK AICFKEALEN NFKTYQQQVV KNAQAMAKVI QERGYEIISG GTENHLMLIS LVKQEMTGKE ADKWLGDAHI TVNKNAVPND PKSPFVTSGI RIGTPAITTR GFNEAQAGAL AGWICDVLDS RGDEAATAEV RSKVEAICKE LPVYAKNQ
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