Gene Psyc_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0290 
SymbolglyA 
ID3514184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp355846 
End bp357102 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content46% 
IMG OID637668977 
Productserine hydroxymethyltransferase 
Protein accessionYP_263594 
Protein GI71064867 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAG ATATTTCTAT CAAAGATTTT GATCCAGTAC TTGCTAAAGC CATGGCTGCT 
GAAAGCGTGC GTCAAGAGAA CCATATTGAG CTTATCGCTT CAGAAAACTA CTGCTCACAA
GCTGTGATGG AAGCACAAGG TACTGATTTG ACCAACAAAT ACGCTGAAGG CTATCCTGGT
AAGCGTTATT ATGGTGGTTG TGAGCACGTT GACGTCGTTG AGCAATTGGC AATCGACCGT
GCAAAAGAAT TGTTTGGTGC AGAATATGTG AACGTACAGC CACATTCTGG TAGCCAAGCA
AACTCTGCTG TGTTCTTAGC ACTGCTTGAA GCTAATGATA CGGTACTAGG CATGAGCTTA
GATGCTGGTG GTCACTTGAC TCATGGCGCG CACATCAACT TTTCAGGTCT AAACTATAAT
GCAGTACAGT ATGGTTTGGT CGAAGGCACT GGTCTTATCG ATTATGACCA AGTTGAGAGC
TTGGCAAAAG AGCATAAGCC AAAAATGATC ATCGCTGGTT TCTCAGCATA CTCACAAGTC
GTTGATTGGG CGCGTTTCCG CGAAATCGCT GACGAAGTGG GCGCTTATTT GCTCGTCGAT
ATGGCACACG TTGCTGGTCT TATCGCTGGT GGCGTTTACC CAAGCCCAGT ACCATTTGCT
GATGTGGTTA CGACGACAAC GCACAAAACT CTACGTGGCC CACGTTCAGG TATGATTTTG
GCTCGTGATG AGAAACTTGC CAAAAAACTA AACTCTGCTG TCTTCCCAGG CAATCAAGGT
GGCCCGTTGA TGCATGTTAT CGCGGCCAAA GCGATTTGCT TTAAAGAAGC CTTAGAAAAT
AACTTCAAAA CCTATCAGCA GCAAGTGGTG AAAAATGCCC AAGCGATGGC AAAAGTCATC
CAAGAGCGCG GCTATGAAAT CATCTCTGGT GGCACTGAAA ACCATCTAAT GCTGATCAGC
CTAGTGAAGC AAGAAATGAC CGGTAAAGAA GCGGATAAAT GGTTGGGTGA TGCGCATATC
ACTGTGAATA AAAACGCCGT GCCAAACGAT CCTAAATCTC CATTCGTAAC CTCTGGTATC
CGTATTGGTA CACCAGCGAT TACGACTCGC GGCTTCAATG AAGCGCAAGC AGGTGCTTTG
GCAGGTTGGA TTTGTGACGT GTTAGACAGC CGTGGCGATG AAGCAGCAAC CGCTGAAGTG
CGTAGCAAAG TAGAAGCAAT CTGCAAAGAG CTTCCTGTTT ATGCTAAAAA CCAGTAA
 
Protein sequence
MFKDISIKDF DPVLAKAMAA ESVRQENHIE LIASENYCSQ AVMEAQGTDL TNKYAEGYPG 
KRYYGGCEHV DVVEQLAIDR AKELFGAEYV NVQPHSGSQA NSAVFLALLE ANDTVLGMSL
DAGGHLTHGA HINFSGLNYN AVQYGLVEGT GLIDYDQVES LAKEHKPKMI IAGFSAYSQV
VDWARFREIA DEVGAYLLVD MAHVAGLIAG GVYPSPVPFA DVVTTTTHKT LRGPRSGMIL
ARDEKLAKKL NSAVFPGNQG GPLMHVIAAK AICFKEALEN NFKTYQQQVV KNAQAMAKVI
QERGYEIISG GTENHLMLIS LVKQEMTGKE ADKWLGDAHI TVNKNAVPND PKSPFVTSGI
RIGTPAITTR GFNEAQAGAL AGWICDVLDS RGDEAATAEV RSKVEAICKE LPVYAKNQ