Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0278 |
Symbol | |
ID | 3514172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 335859 |
End bp | 336467 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637668965 |
Product | rhomboid family protein |
Protein accession | YP_263582 |
Protein GI | 71064855 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTAATC AGACGACGCT TATCATTATT ATTACGGTTA TTGTCAGTTT GTTGGCGTGG CAAAACAAAG CACTGTTTAA TCGACTCATT TTTTATCCGC CAGCAGTAAA CAATGGTCAA TGGGATCGAT TTGTTACTCA TGGATTTATC CATGCTGATA GCATGCACTT GCTCTTTAAT ATGTTTACCT TATACTTTTT TGGTCGTGCC ATTGAGGGCT TATATCAGAA ATTTTTATTC GGCTATGGCT TTTTGCTTTT TTATGTACTG GCTATTATTG TCGCGATGAT TCCAAGTTAT ATTAAGCACA AGCAAAGTGC CAGTTATTTA AGTCTTGGCG CATCAGGCGG TGTATCTGCT GTATTGTTTG CGTTTATCTT GCTTGCTCCT TGGGAAAAAA TCTATCTGTT TGCGATCATC CCTATCCCAG CCATCTTATT TGCAGTTGCC TATGTCGCTT ACAGTATCTA TTCTGATAAA CGCGGCGGCT CAAACATCAA TCATATGGCA CATATGTGGG GCGGCGCGTT TGGTGTCATA GCTACCATCA TTTTAGAGCC ACAAGTCCTA CCTCATTTTC TAAATGCCCT ATTATCACCT GGATTTTAG
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Protein sequence | MFNQTTLIII ITVIVSLLAW QNKALFNRLI FYPPAVNNGQ WDRFVTHGFI HADSMHLLFN MFTLYFFGRA IEGLYQKFLF GYGFLLFYVL AIIVAMIPSY IKHKQSASYL SLGASGGVSA VLFAFILLAP WEKIYLFAII PIPAILFAVA YVAYSIYSDK RGGSNINHMA HMWGGAFGVI ATIILEPQVL PHFLNALLSP GF
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