Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0272 |
Symbol | |
ID | 3514132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 329289 |
End bp | 330443 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637668959 |
Product | erythronate-4-phosphate dehydrogenase |
Protein accession | YP_263576 |
Protein GI | 71064849 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.444038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA AGGTAGATAC GATTAAAAAT CTCACTATTG TGGCTGATAG TAATATCGCA AGCCTTGATG AATTTTTTAA TCCTATAGCG CTGGGTCAAA ATACTGAGCA ACAGGTGCAG GTAATACGCG TTGCTGGACG CGATATCAAT GCGCAATTAT TGGCGGACTT GCAGCCTGAT GTGCTGTTGA TACGTTCAGT CACCCAAATA GACCAAGCAT TATTAGCTAA TAATAATAGT GTCAAATTCG TCGGTTCTGC GACCATTGGT ACTGATCATG TCGATCAAGA TTATTTGGCA GAACGCAATA TTACCTTTGC CAATGCCACT GGCTGTAGCA AACATTCAGT CGCGCAATAT GTAGTGAGCG CTATTTTGAC ATTGCGTCCA CAGTATTGGG CACAATCTAT GACGCCATTA ACATTGGGCA TCATTGGGCT TGGTAATATT GGCAGTACGC TGGCTCAGTA TGCCAGTGAT TTGGGCTGGC AAGTATTGGG TTATGATCCA TTGTTAGCCA CGTCCGATAT CAATAATGCC AGTCTTGAGC AAGTATTATG TCAAAGCGAC ATCGTAAGTT TACATGTGCC TTTGACGGAT AAAAAAGATA CGGATACGCA AGGGGCAATG AGCATCAGCA ATAATTTCAG CGACTATCCA ACCCGTCATT TAATAAATGC AGAAACTTTG GCACGGATGT CGCCGCATAC CATGCTGATT AATAGTGCGC GTGGACCTGT GATTGACGCC GCTGCTCTCG AAGCCGATAT CGATGCGACC GAACGCCAAG TGGTATTGGA TGTGTTTGAG CACGAGCCAC AGATAGCGGA GAGTTTACTA TCCAAGCTTG CGATTGCCAC ACCGCATATC GCTGGCTATA CGTTAGAGGG TAAGCTACGC GGTACGCAAA TCATCTATGA TGCCCTATGT GAAAAATTGG CAGTGCTGCC TGTGTTGTCG ATGCATCAGC TGCTACCACT CAATACTTAT CTATGGTCTG AGCTAAAAGA AAATCCAGAC AGATTACTAA AGTTTTATGA TATTAAAAAA GACGATACGG CTTTAAGAAA TAAAATAACG AGTGGTCAAG TGAAAGGGTC GGATTTTGAT CAGCTACGCC GTGATTACCA TTTGCGCCGT GAATGGCAAG CGTAA
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Protein sequence | MKNKVDTIKN LTIVADSNIA SLDEFFNPIA LGQNTEQQVQ VIRVAGRDIN AQLLADLQPD VLLIRSVTQI DQALLANNNS VKFVGSATIG TDHVDQDYLA ERNITFANAT GCSKHSVAQY VVSAILTLRP QYWAQSMTPL TLGIIGLGNI GSTLAQYASD LGWQVLGYDP LLATSDINNA SLEQVLCQSD IVSLHVPLTD KKDTDTQGAM SISNNFSDYP TRHLINAETL ARMSPHTMLI NSARGPVIDA AALEADIDAT ERQVVLDVFE HEPQIAESLL SKLAIATPHI AGYTLEGKLR GTQIIYDALC EKLAVLPVLS MHQLLPLNTY LWSELKENPD RLLKFYDIKK DDTALRNKIT SGQVKGSDFD QLRRDYHLRR EWQA
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