Gene Psyc_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0272 
Symbol 
ID3514132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp329289 
End bp330443 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content44% 
IMG OID637668959 
Producterythronate-4-phosphate dehydrogenase 
Protein accessionYP_263576 
Protein GI71064849 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.444038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA AGGTAGATAC GATTAAAAAT CTCACTATTG TGGCTGATAG TAATATCGCA 
AGCCTTGATG AATTTTTTAA TCCTATAGCG CTGGGTCAAA ATACTGAGCA ACAGGTGCAG
GTAATACGCG TTGCTGGACG CGATATCAAT GCGCAATTAT TGGCGGACTT GCAGCCTGAT
GTGCTGTTGA TACGTTCAGT CACCCAAATA GACCAAGCAT TATTAGCTAA TAATAATAGT
GTCAAATTCG TCGGTTCTGC GACCATTGGT ACTGATCATG TCGATCAAGA TTATTTGGCA
GAACGCAATA TTACCTTTGC CAATGCCACT GGCTGTAGCA AACATTCAGT CGCGCAATAT
GTAGTGAGCG CTATTTTGAC ATTGCGTCCA CAGTATTGGG CACAATCTAT GACGCCATTA
ACATTGGGCA TCATTGGGCT TGGTAATATT GGCAGTACGC TGGCTCAGTA TGCCAGTGAT
TTGGGCTGGC AAGTATTGGG TTATGATCCA TTGTTAGCCA CGTCCGATAT CAATAATGCC
AGTCTTGAGC AAGTATTATG TCAAAGCGAC ATCGTAAGTT TACATGTGCC TTTGACGGAT
AAAAAAGATA CGGATACGCA AGGGGCAATG AGCATCAGCA ATAATTTCAG CGACTATCCA
ACCCGTCATT TAATAAATGC AGAAACTTTG GCACGGATGT CGCCGCATAC CATGCTGATT
AATAGTGCGC GTGGACCTGT GATTGACGCC GCTGCTCTCG AAGCCGATAT CGATGCGACC
GAACGCCAAG TGGTATTGGA TGTGTTTGAG CACGAGCCAC AGATAGCGGA GAGTTTACTA
TCCAAGCTTG CGATTGCCAC ACCGCATATC GCTGGCTATA CGTTAGAGGG TAAGCTACGC
GGTACGCAAA TCATCTATGA TGCCCTATGT GAAAAATTGG CAGTGCTGCC TGTGTTGTCG
ATGCATCAGC TGCTACCACT CAATACTTAT CTATGGTCTG AGCTAAAAGA AAATCCAGAC
AGATTACTAA AGTTTTATGA TATTAAAAAA GACGATACGG CTTTAAGAAA TAAAATAACG
AGTGGTCAAG TGAAAGGGTC GGATTTTGAT CAGCTACGCC GTGATTACCA TTTGCGCCGT
GAATGGCAAG CGTAA
 
Protein sequence
MKNKVDTIKN LTIVADSNIA SLDEFFNPIA LGQNTEQQVQ VIRVAGRDIN AQLLADLQPD 
VLLIRSVTQI DQALLANNNS VKFVGSATIG TDHVDQDYLA ERNITFANAT GCSKHSVAQY
VVSAILTLRP QYWAQSMTPL TLGIIGLGNI GSTLAQYASD LGWQVLGYDP LLATSDINNA
SLEQVLCQSD IVSLHVPLTD KKDTDTQGAM SISNNFSDYP TRHLINAETL ARMSPHTMLI
NSARGPVIDA AALEADIDAT ERQVVLDVFE HEPQIAESLL SKLAIATPHI AGYTLEGKLR
GTQIIYDALC EKLAVLPVLS MHQLLPLNTY LWSELKENPD RLLKFYDIKK DDTALRNKIT
SGQVKGSDFD QLRRDYHLRR EWQA