| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0242 |
|---|
| Symbol | |
|---|
| ID | 3515085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 288187 |
|---|
| End bp | 289947 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637668930 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_263547 |
|---|
| Protein GI | 71064820 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0427625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA TAAATAAACA GCTTGTTGAT CCTAATATTG TCTTAATAGT ACTGATCGGT
ATTGGTTATT TGGTTGGAGT GCTTAATACT TTTCATCGCT TTCCATCAGC TAATGATATG
TATCCTGATT TGGTTGCCAT GATGTTTGTG GCAGCTGGGT TGGTTTATTG GTATGCGCTA
AGTCATGTCA AGCACATAAG TCTATCTACG ATAGCATGGG CTATTATCTT TGGGTTAATT
GCAGTACAGC CTTATATCAA TCGGATTACT TATCCAAGCG GCTTAATTTT TGATCTTTCA
GTTCTACTGA CGTGCGTAGC AGTCAGTATC TGTGTAGCGA ATGCTCCTAA TAAGGCTAAA
CTGTTTCAAA TACTTATGTG GCTGATGGTG AGCGCAGGCG TGTTGACTGC CTTGACGCAG
ATAGCTCAAT ATCTGAGATT AGACTTACCT ATGTATTTGC TCTATCCAAA TTCGGCAGGC
GCGCGTATCT CTGCTAATAT CAGCCAGCCC AATCAAGCGG CATTTATTTT AGCGCTTAGT
ACCGGTGGGC TATTATATCT ATCGAGCCTT TGTAAAGGTG TTTTTAAGTC AAGTTTAATA
GTCCTACCAA GCTTTTTATT GGCAATTGGC TTGGGATTAT CAGCGAGTCG CACAGGCTTG
ATACTGATGG TTATTGCTAT ATTGGGTTAC TTCTTACTAT TTAAGCTACC TGTGAAGATT
AAAGTAATCA CAGCCAGTGC CTGTACCACG TTGTTATTGC TAGGCTATGG TGTAGGTAGT
TACTTGCTCT TATATAATAA CAGTGCTGCA GTCAGTGGTG CTGCACGTAT ATCTAATACC
GCGCTTGACT CACGCTGGAT ACTGCAGCAG CAGGCATGGC TCTTCTTCCA AGAAAATCCG
TTGACGGGAG TAGGCTGGGG TAACCTAATG AAAGCATCAT TAGACCATGC CCAACAGTTA
TCATTTTTTT ATGCTAATGG TCATTCGCAT TTCTTTATAT CTAATATAGC AGCAGAGACA
GGTATCATAG GACTCCTTAC TTTATCTCCG TTTGCTTATA TCTTAGTTAA AAACTTTAAT
TTTAAACTAT CCAATTTAGA CGCTGCTGTT TACATGTTAT TAGCGATTTT TATCGCTTAC
TCTAGTTCTG AGTTTCCGCT ATGGCTACCT AGATATCTAA TTATTTTCGT CGTTTTATTA
AGCTTTATAG ATCATAAGAA AATTGAGCTA TCAGTTAAAA TGGGGCAGCT CATAAAATAT
AGTTTATTAT TTCTTTCAAT TGTTTTAGCA TTAGGTAGTG TCTTTTATCA AATAAACTAT
CGGGCTTATA GCAAAGTTTT TTACGCTATT GCTGAGCCTT CATTTAGCTA TCAAGAAAAA
GAAGACCGAC TATTAAACCT AACACCTGTG ATCGGTTTTG AGCAATTTTA TGATATATTA
TTTTTTCACA TGATGTCGGA AGACATTAAT AATATTGAAT ATAAAGCTCA ATTAACCAGT
AAGGTATTGA GCAATACGTT GTCTTATAAG GTATTAGTTA GATCAGCAGA TATTTATTTA
TTAGCAGATG ACAAGAATAG AGCATTAGAA CTTTATAAAA ATGCGTGTAT ATTTAACTAT
GCGCAATATT GCGAACAGCT GGTAACAGAT TTGAGTGATA GGGCAGTTAA AGGTGAAGAT
GGTTTACAGG AAGTTAACTT AAGCTTTCAG AAATGGCGTT TAGAAAATCC TAAAAAGACA
GGATTGGATA ATAACCAGTA A
|
|---|
| Protein sequence | MKIINKQLVD PNIVLIVLIG IGYLVGVLNT FHRFPSANDM YPDLVAMMFV AAGLVYWYAL
SHVKHISLST IAWAIIFGLI AVQPYINRIT YPSGLIFDLS VLLTCVAVSI CVANAPNKAK
LFQILMWLMV SAGVLTALTQ IAQYLRLDLP MYLLYPNSAG ARISANISQP NQAAFILALS
TGGLLYLSSL CKGVFKSSLI VLPSFLLAIG LGLSASRTGL ILMVIAILGY FLLFKLPVKI
KVITASACTT LLLLGYGVGS YLLLYNNSAA VSGAARISNT ALDSRWILQQ QAWLFFQENP
LTGVGWGNLM KASLDHAQQL SFFYANGHSH FFISNIAAET GIIGLLTLSP FAYILVKNFN
FKLSNLDAAV YMLLAIFIAY SSSEFPLWLP RYLIIFVVLL SFIDHKKIEL SVKMGQLIKY
SLLFLSIVLA LGSVFYQINY RAYSKVFYAI AEPSFSYQEK EDRLLNLTPV IGFEQFYDIL
FFHMMSEDIN NIEYKAQLTS KVLSNTLSYK VLVRSADIYL LADDKNRALE LYKNACIFNY
AQYCEQLVTD LSDRAVKGED GLQEVNLSFQ KWRLENPKKT GLDNNQ
|
|---|
| |