Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0180 |
Symbol | |
ID | 3514217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 208866 |
End bp | 210530 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637668867 |
Product | AMP-dependent synthetase and ligase family protein |
Protein accession | YP_263487 |
Protein GI | 71064760 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.115712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACT TTCACACAGG TCTCGGCAAA AATGCTGCTA ACCATCAACC GCTTACCCCT ATTGACTTCA TCATTCGTAG CGCTCAGGTC TATCCTGACA GAACGGCTAT CATCTATGAC GACCTAGAAC ATAATAATCT CACGCAAACG TGGCAACAGA CTTACGATCG TTGCAGACAA CTGGCTGATG GTCTACGTAA ATTGGGTGTT GATAAAAATG ACACGGTTGC GGTCATGATG CCGAATACGC CAGCAATGGT CGAATGTGCC TTTGGGGTGC CCATGTCAGG TGGCGTGCTA TGTACGTTAA ACACTCGTCT CGATATCAAT GCGCTCAGCT TTTGCTTACA ACACTCAGAA GCCAAAGTAT TGATTTTAGA CAGCGAGTTT GCTGAGCATG CTGAGATGAT CGACGAAACG TTTCCCAACC TTATCGTTAT TCATGCGACA GATGCAGCGG TCGATATCGA GCGTTTTGGA CAAATGAGTT ATGAAGAATT AATCGCCAGC GCTGATAGTT TGGATAATTG GGAAAAACCA ACAGATGAAT GGGATGCAAT TGCTCTGAAC TATACGTCTG GCACCACTGG TAAGCCCAAA GGTGTGGTTT ATCATCACCG CGGTGCGACA CTTAATGCCG TGTCCAATAT TTTAGATTGG GATATGCCAA AGCACCCAAT GTATCTATGG ACGCTGCCAT TATTTCATTG TAATGGTTGG TGTTTTCCTT GGACGATCGC TGAGCGAGCT GGTGTCAACG TCTGCTTGCG CAAGATTGAC GCTGATTTGA TTTTGCAGCT GATTGCCAAA CATAAAGTCT CACATTATTG CTCAGCGCCT GTGGTGCATA ATATGATTGC CGGTGGCAAG CCTGAATACA AAGAAGCCAT CAATCATGAA GTTAAGGGCT GGGTCGCTGG TGCGCCGCCG TCTGAAACCA TGCTGGCAGC CATGGAAGCC ATGGGCTTTC ATATCTCTCA TGTTTATGGT CTCACCGAAG TTTACGGACC TGTCACCATC TGCGCTGAGC AACAAGAATG GGCTACGCTT GATGTCGCTG GGCGCGCGCA GAAAAAATCA CGTCAAGGCG TGACCTCACA TTTGATGAGC GGATTTGAGC TGTTTAAACA AGGTACCACT GAACCGGTTG CCGCTGATGG TAAAGAAATG GGCGAGCTGG CACTGCGCGG CAATATGGTG ATGAAAGGTT ATCTAAAAAG CCGTAAGGCC ACCGAAGAAG CCTTTACTGA TGGTTGGTTC CGCACCGGTG ATTTGGGTGT TAAATATCCT GACGGCTATA TCAAAATCAT GGACAGGCTT AAAGACATCA TCATCTCAGG TGGCGAAAAC ATCTCTAGTA TCGAAGTCGA AAACGTCCTA TATAAAATGC CAGAAATCCA AAGCTGTGCT GTAGTCGCTG CGCCGCATGA TAAATGGGGT GAAGTACCGG TGGCATTTAT CGAGATTCAT GCTGGCAGCA CTTTACAGCG CGATAATGTG ATGGCGCATT GTAAACAGCA CCTTGCTAGT TTTAAAATGC CTAAATATAT TATTTTTGCT GAAATCCCAA AGACCAGCAC CGGTAAGGTA CAAAAGTTTG AACTGCGCCA AGCGGCCAAA TCCTTGGCAC ACGAAACGCC TAAAGTAACG GCAAGTGCCA AGTAG
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Protein sequence | MTDFHTGLGK NAANHQPLTP IDFIIRSAQV YPDRTAIIYD DLEHNNLTQT WQQTYDRCRQ LADGLRKLGV DKNDTVAVMM PNTPAMVECA FGVPMSGGVL CTLNTRLDIN ALSFCLQHSE AKVLILDSEF AEHAEMIDET FPNLIVIHAT DAAVDIERFG QMSYEELIAS ADSLDNWEKP TDEWDAIALN YTSGTTGKPK GVVYHHRGAT LNAVSNILDW DMPKHPMYLW TLPLFHCNGW CFPWTIAERA GVNVCLRKID ADLILQLIAK HKVSHYCSAP VVHNMIAGGK PEYKEAINHE VKGWVAGAPP SETMLAAMEA MGFHISHVYG LTEVYGPVTI CAEQQEWATL DVAGRAQKKS RQGVTSHLMS GFELFKQGTT EPVAADGKEM GELALRGNMV MKGYLKSRKA TEEAFTDGWF RTGDLGVKYP DGYIKIMDRL KDIIISGGEN ISSIEVENVL YKMPEIQSCA VVAAPHDKWG EVPVAFIEIH AGSTLQRDNV MAHCKQHLAS FKMPKYIIFA EIPKTSTGKV QKFELRQAAK SLAHETPKVT ASAK
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