Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0167 |
Symbol | thiD |
ID | 3515127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 193860 |
End bp | 194654 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637668850 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_263474 |
Protein GI | 71064747 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00133155 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000172032 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGACCAG TCGTATTGTG CTTTTCAGGC TTAGATCCCT CCGGTGGGGC AGGATTGCAA GCGGATATTG AAGCCATCGG GCAAGCAGGC GCTCATGCTG CTATCGCCTG TACCGCGATT ACCGTACAAA GCTCACAGCA GGTCATTGGC TTTGAAGCAT GTGCAGCAGA TTTAGTAAGA GATCAAGCGG TAGCAGTGCT CGATGATTTG CCTGTTAACG TTATCAAGTC AGGCATGCTC GGCACTACCG ACAATATTGC TATGCTAACC CAGTTATTTG CTGATGAGAC TATCCCTGAG GGGACACTTT TTGTTTTAGA TCCGGTATTG GTTGCCAATA GCGGTGACAG TTTGGGTGAT GAGCAGACGC TGGTCACCGC ATTTAGACGG TTGCTACCCT ATGCCACCTT AATTACCCCT AATACCCATG AGCTACGCGC CTTGAGTGCT GAACAAGACT TACATATAGG GGCGCAAAAA TTATGCGCAC AAGGAACCTA TGCCGTGTTG GTCAAAACTT CACATGATTT TGATAGCGGT GATATTGAGC AGTATTTATA CATAGAAGGT GAAATGGTAT ATAAAAGTAC CTTGCCGCGC CTAGATGGTG AGTTTCATGG CTCTGGCTGC TCGCTAGCCA GTTTTATCGC GGGACGCTTG GCAATGGGTG ATGCGCTTAT CGATGCGGTT AAGGCAGCGG ATAGCTGGAT TACCAAAACC TTGCGTGCTG CTGACGTGCC TCACCCTGAG GATTCTAAAG CGCAATTGAT ACCCAATCGC TTTGTCCGCT TTTAA
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Protein sequence | MRPVVLCFSG LDPSGGAGLQ ADIEAIGQAG AHAAIACTAI TVQSSQQVIG FEACAADLVR DQAVAVLDDL PVNVIKSGML GTTDNIAMLT QLFADETIPE GTLFVLDPVL VANSGDSLGD EQTLVTAFRR LLPYATLITP NTHELRALSA EQDLHIGAQK LCAQGTYAVL VKTSHDFDSG DIEQYLYIEG EMVYKSTLPR LDGEFHGSGC SLASFIAGRL AMGDALIDAV KAADSWITKT LRAADVPHPE DSKAQLIPNR FVRF
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