Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0150 |
Symbol | purC |
ID | 3514516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 178866 |
End bp | 179579 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637668834 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_263458 |
Protein GI | 71064731 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000164845 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000304375 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAAGC AAGAAATGCT CTATAAAGGC AAAGCCAAAT CTGTTTATGA AACAGAAGAC AACGATCTGC TGATTTTACA TTTTCGTGAT GACACCTCAG CGCTTGATGG TAAGCGTATC GAGCAGTTAG CACGCAAAGG CGTGGTTAAT AATCGCTTTA ACGCGTTTAT TATGCAAAAG CTGGCGGACG CTGGTATTGA GACGCATTTT GAAAAGCAAT TGTCTGATGA CGAAGTGTTG GTCAAGCGTT TGGATATGAT TCCGGTTGAA TGCGTTGTGC GTAACTTTGC TGCGGGCAGT TTGGTACGCC GTTTAGGGTT AGAAGAAGGG CAGGCCTTGA CGCCACCGAC GTACGAGCTG TTCTATAAAG ATGATGCGCT TGGTGATCCG ATGGTTAATG AGTCAATCTC AATCTCTCTT GGCTGGGCAA CCGACGCACA GCTCGCAAAA ATGAAAGAGC TGAGTCATCA AGTGAATGAA GTATTAACAG CCCTGTTTGA TGCTGGCGAT TTGATACTAG TAGATTTCAA ACTAGAGTTT GGTGTGTTCC ATGACCGCAT CATCTTAGGT GATGAGTTCT CACCAGATGG CTGCCGCATT TGGGATAAAG CCACCAAGAA AAAGCTCGAT AAAGACCGCT TCCGTCAGTC ACTAGGTGAT GTCATCGAAG CCTACGAAGA AGTAGCAAGT CGTATTGGTG TACCACTAAG CTAA
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Protein sequence | MQKQEMLYKG KAKSVYETED NDLLILHFRD DTSALDGKRI EQLARKGVVN NRFNAFIMQK LADAGIETHF EKQLSDDEVL VKRLDMIPVE CVVRNFAAGS LVRRLGLEEG QALTPPTYEL FYKDDALGDP MVNESISISL GWATDAQLAK MKELSHQVNE VLTALFDAGD LILVDFKLEF GVFHDRIILG DEFSPDGCRI WDKATKKKLD KDRFRQSLGD VIEAYEEVAS RIGVPLS
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