Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0127 |
Symbol | |
ID | 3514731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 149143 |
End bp | 151665 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637668811 |
Product | hypothetical protein |
Protein accession | YP_263435 |
Protein GI | 71064708 |
COG category | [K] Transcription |
COG ID | [COG2183] Transcriptional accessory protein |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.294313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCA CTGATACCTT AACGCCATCT CAAACCTCGA CAAATGCACA GGTTTTGGAT GCAACCACAC ACGCGAATAT TCACGACAAG CTTGCTCGCG CGCTTGGCAT TAAGACTGCT CAAGTCAATG CATTTGTCAA ACTGTACGAT GAAGGCGCGA CCGTTCCGTT TATTGCGCGT TATCGCAAAG AGAAGACTCA GAATCTTGAT GATGCGCAAT TGCGCGCGCT AGAGAAATCT CTCAATTATG AGCGTGACAT GGCAACCCGT CGCCTCAAAA TCATTGAATT GCTCAGCACA CAAGGCAATT TGACTGAGGA GCTTCAGACA CGTATTGATA ATGCAACATC AAAACTTGAG CTTGAAGACA TCTATTTGCC ATATCGTCCG CGTCGCCGCT CACCAGCTGC CAAAGCACGC GCTGCTGGTC TTGACGTTGC AGCACAAGCG CTGTTGACGC AAGACGTGAC ACCGACCGAT GCGTTAGCAG ACTATCAAGT GCAATCGAGC ATTACTGATG AAAGTGGTAA TGAGATTGAA GTTGACTTCA GTGATATCGA AAAGCAATTG GCGGGCGTAC AAGCCATCAT CGTTGATGAA TGGACTCAAG CGTTAGATTT GTTAGACCAT TTACGTAGTA GTTTTGCCAA AACAGCCAGC ATCGTATCTA GTGTTGCCAG TGAGGAAAAG CGTGAAGTCG GTGAGAAATT CAAAGATTAC TTTGAGCATA GCGAAAGTCT GGCCCGCCTG CCAAATCATC GTCTATTAGC GATGCTACGT GGTCGTCAAG AGAATGTTTT GGGTCTAAAA ATTGAAGGCG AAGATGCGCC ATTTATTGAA AAAATCATTA AGCATTTTGC GATTGATGGT AAAGCACCAA CCGAGCGTCA AGAATTTTTG GCAGAAGCCG CAAGCAGCTT ATGGAAAGAC AAATGGCGTC CACATATCGA GCATCGTTTA TTGACCGAAA AACGTCTGAC CGCAGAAGCG GCTGCGATTG ATGTTTTTGC CAATAATTTA CAGCATTTAC TTATGTCAGC GCCTGCTGGT CGCAAAGTGA TTTTGGGTGT TGACCCCGGT ATCCGTCATG GCGTAAAAAT GGCGATTGTT GATGCCCAAG GTCATGTGAT GTTAGATGGT GAAGATAAGC CTGTTATCGC CACGGTCTAT CCATTTGCGC CTGATAATAA AATGACTGAA GCCAAAGCAG TCATCGATGA GCTTTTAAGC ACTTATAACG TGGATCTAGT GGCTATCGGT AACGGTACGG CAAGCCGCGA AACAGATGCG ATGATTAAAG AGATTTTGGC GGCGAACGAG GCATTAAAAG CCAAAGCGGT CATCGTTAAT GAATCTGGCG CATCAGTTTA TTCTGCTAGT GAGCTTGCCA CTGATGAGCT TGGTAATTTA GATGTGTCTG TACGCGGGGC GGTATCTATT GCTCGCCGTT TGCAAGATCC ATTGTCAGAG TTGGTCAAGG TTGATCCAAA AGCTATTGGT GTTGGTCAAT ACCAGCATGA TGTCAATCAA ACTCAGTTAG CAGATAGCCT AGATAAAGTC ACGCAAGACA GCGTTAACGC CGTTGGTGTT GATGTGAATA CGGCAAGTCC AGCTATCTTG GCACATATCG CTGGTTTGAA TCGCAATGTT GCTCAGCAAA TCGTCACCTA TCGTAAAGAG CATGGTGCAT TTGACAGTCG CGAGTCATTG AAAAATGTTC CGCGCTTAGG TGCTAAGACA TTTGAGCAAG CCGCCGGTTT CTTACGTATA CATGATGGCA GCAATCCACT TGATGCTACT GGTGTACATC CAGAAAGCTA TAAGCTGGTT GATAATTTAC TTACCCAAAC GGATAAATCC TTGCCAGAAG TTATCGGTAA CGATGGTGTG CTAAACAGTA TCGATACCAC GGCGCTAGCT GCTAATGATG AAAATGTTAG CGTAAAAGCG ATTTTAGATG AGCTTGCAAA GCCAGCTCGT GACCCACGCC CTGAGTTTAA GACGGCTAAC TTCCGTGATG ATGTGAACAG CATTAAAGAT TTGAGCGAAG GCATGATATT AGAAGGGGTT GTCACCAACG TAACAGCCTT TGGTTGTTTC ATCGATGTTG GTGTGCATCA AGATGGCTTA GTTCATATCT CGCAAATGGC GAATGACTTT GTCGCAGACC CGATGAATCG CGTCAAGCCC GGCGATATCG TTTCAGTCCG TGTTATCTCT ATTGACGAAA AACGCGGTCG TATTGGTTTT AGTATGAAAC CTGAAGCCGA AAAACCCGCA CGTCCAGCAG CAAAACCTGC GACGGCAAAG GTTACTAATA ATGATGAGAA AACCAGTCGT CCACGCAGCA ATCGCCCAGC TGGCGATAAG CGCCCGTCTA AGCCTAAGCG TCAACCTAGT AGTAGCAATC ATAGCGACAG TCGCAGCAAG GCTCCTCGTG CGGAAAAAGC AGAAGCTCCT AGCAAGATGG GTACCTTTGG CGCGCTGTTG CAAGAAGCAG GTGTGACTAA AGCTAAGAAA TAA
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Protein sequence | MSSTDTLTPS QTSTNAQVLD ATTHANIHDK LARALGIKTA QVNAFVKLYD EGATVPFIAR YRKEKTQNLD DAQLRALEKS LNYERDMATR RLKIIELLST QGNLTEELQT RIDNATSKLE LEDIYLPYRP RRRSPAAKAR AAGLDVAAQA LLTQDVTPTD ALADYQVQSS ITDESGNEIE VDFSDIEKQL AGVQAIIVDE WTQALDLLDH LRSSFAKTAS IVSSVASEEK REVGEKFKDY FEHSESLARL PNHRLLAMLR GRQENVLGLK IEGEDAPFIE KIIKHFAIDG KAPTERQEFL AEAASSLWKD KWRPHIEHRL LTEKRLTAEA AAIDVFANNL QHLLMSAPAG RKVILGVDPG IRHGVKMAIV DAQGHVMLDG EDKPVIATVY PFAPDNKMTE AKAVIDELLS TYNVDLVAIG NGTASRETDA MIKEILAANE ALKAKAVIVN ESGASVYSAS ELATDELGNL DVSVRGAVSI ARRLQDPLSE LVKVDPKAIG VGQYQHDVNQ TQLADSLDKV TQDSVNAVGV DVNTASPAIL AHIAGLNRNV AQQIVTYRKE HGAFDSRESL KNVPRLGAKT FEQAAGFLRI HDGSNPLDAT GVHPESYKLV DNLLTQTDKS LPEVIGNDGV LNSIDTTALA ANDENVSVKA ILDELAKPAR DPRPEFKTAN FRDDVNSIKD LSEGMILEGV VTNVTAFGCF IDVGVHQDGL VHISQMANDF VADPMNRVKP GDIVSVRVIS IDEKRGRIGF SMKPEAEKPA RPAAKPATAK VTNNDEKTSR PRSNRPAGDK RPSKPKRQPS SSNHSDSRSK APRAEKAEAP SKMGTFGALL QEAGVTKAKK
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