Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0101 |
Symbol | sdhB |
ID | 3514471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 117251 |
End bp | 117961 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637668785 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_263409 |
Protein GI | 71064682 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGAG GTACTCGCAC CATCGAAATC TATCGCTACG ATCCTGATCT GGACGCAGCG CCGCGTATGC AAACTTATAC GGTTGAGTTA TTAGACTCAG ATCGTATGTT GCTTGACGTA TTATTACGCC TAAAAAAGGA AGATGAAACC CTCACCTTCC GTCGCTCATG CCGTGAAGGC ATCTGTGGCT CTGATGGCAT GAATATTAAC GGTAAAAATG GTCTAGCATG TCTGATCAAC ATGAACACTT TGCCAGAAAA AGTAACGGTC CGTCCGTTAC CAGGTTTGCC AGTAGTTCGT GATTTGGTCG TTGATATGAA CCAATTCTAT GAGCAGTACG AAAAAGTACA CCCATTCTTA ATCAATGATC AGCCAGCGCC TGCGACGGAG CGTTTGCAGT CACCTGAGCA ACGCGAAAAG CTCAATGGTT TGTATGAGTG TATTTTATGT GCTTGCTGTT CAACCAGCTG CCCATCATTC TGGTGGAATC CTGATAAGTT CTTAGGACCA TCAGCACTAT TGCATGCCGA TCGTTTTGTT TCTGACAGCC GTGATAGTGA TACTCGCGCT CGTCTGGCTC GTTTAGACGA TCCATTCAGC TTATTTCGTT GCCGCGGTAT CATGAATTGC GTATCAGTAT GTCCAAAAGG TTTGAATCCA ACCAAAGCTA TCGGTCATCT GCGTAATTTG TTGCTTGATC AAGCAGGTTA A
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Protein sequence | MSRGTRTIEI YRYDPDLDAA PRMQTYTVEL LDSDRMLLDV LLRLKKEDET LTFRRSCREG ICGSDGMNIN GKNGLACLIN MNTLPEKVTV RPLPGLPVVR DLVVDMNQFY EQYEKVHPFL INDQPAPATE RLQSPEQREK LNGLYECILC ACCSTSCPSF WWNPDKFLGP SALLHADRFV SDSRDSDTRA RLARLDDPFS LFRCRGIMNC VSVCPKGLNP TKAIGHLRNL LLDQAG
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