Gene Psyc_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0101 
SymbolsdhB 
ID3514471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp117251 
End bp117961 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content45% 
IMG OID637668785 
Productsuccinate dehydrogenase iron-sulfur subunit 
Protein accessionYP_263409 
Protein GI71064682 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAG GTACTCGCAC CATCGAAATC TATCGCTACG ATCCTGATCT GGACGCAGCG 
CCGCGTATGC AAACTTATAC GGTTGAGTTA TTAGACTCAG ATCGTATGTT GCTTGACGTA
TTATTACGCC TAAAAAAGGA AGATGAAACC CTCACCTTCC GTCGCTCATG CCGTGAAGGC
ATCTGTGGCT CTGATGGCAT GAATATTAAC GGTAAAAATG GTCTAGCATG TCTGATCAAC
ATGAACACTT TGCCAGAAAA AGTAACGGTC CGTCCGTTAC CAGGTTTGCC AGTAGTTCGT
GATTTGGTCG TTGATATGAA CCAATTCTAT GAGCAGTACG AAAAAGTACA CCCATTCTTA
ATCAATGATC AGCCAGCGCC TGCGACGGAG CGTTTGCAGT CACCTGAGCA ACGCGAAAAG
CTCAATGGTT TGTATGAGTG TATTTTATGT GCTTGCTGTT CAACCAGCTG CCCATCATTC
TGGTGGAATC CTGATAAGTT CTTAGGACCA TCAGCACTAT TGCATGCCGA TCGTTTTGTT
TCTGACAGCC GTGATAGTGA TACTCGCGCT CGTCTGGCTC GTTTAGACGA TCCATTCAGC
TTATTTCGTT GCCGCGGTAT CATGAATTGC GTATCAGTAT GTCCAAAAGG TTTGAATCCA
ACCAAAGCTA TCGGTCATCT GCGTAATTTG TTGCTTGATC AAGCAGGTTA A
 
Protein sequence
MSRGTRTIEI YRYDPDLDAA PRMQTYTVEL LDSDRMLLDV LLRLKKEDET LTFRRSCREG 
ICGSDGMNIN GKNGLACLIN MNTLPEKVTV RPLPGLPVVR DLVVDMNQFY EQYEKVHPFL
INDQPAPATE RLQSPEQREK LNGLYECILC ACCSTSCPSF WWNPDKFLGP SALLHADRFV
SDSRDSDTRA RLARLDDPFS LFRCRGIMNC VSVCPKGLNP TKAIGHLRNL LLDQAG