| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0100 |
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| Symbol | sdhA |
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| ID | 3514470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 115192 |
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| End bp | 117042 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637668784 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_263408 |
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| Protein GI | 71064681 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.576611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTA GACAAGACAA TACCATTAGC AATATCAAAA CCCTAAACTA TGACGCGGTC
ATCGTTGGTG GTGGCGGTTC AGGTATGCGT GCATCATTGC ATTTAGCTGA AGCCGGCATG
AAGGTTGCAG TATTGACCAA AGTATTCCCA ACTCGCTCGC ACACTGTTGC AGCCCAAGGC
GGTATTGGTG CAAGTCTCGG TAACATGAGC AACGATAACT GGCATTTCCA CTTTTATGAC
ACCGTTAAAG GGTCAGACTG GTTGGGTGAC CAAGACGCGA TTGAATACAT GTGCCGTGAA
GCGCCAAAAG TTGTTTATGA GCTTGAGCAC ATGGGCATGC CGTTTGACCG CAATGAGGAC
GGCACGATCT ATCAGCGTCC CTTTGGTGGT CATACCTCAA ACTATGGCGA GAAAGCGGTA
CAACGTGCGT GTGCTGCTGC TGACCGTACC GGTCATGCAC TATTGCATAC CTTATATCAA
AAAAATCTAC AGCAAGGTAC TGAGTTCTTT ATCGAGTGGA TTGCACTTGA TTTGATCAAA
GATGACGCTG GTAATATCAA TGGCGTTATC GCGATTGAAC AAGAAACAGG TACGGTTGCT
GTGTTCCAAT CACCAATCAC GGTATTGGCA ACGGGCGGTG CTGGTCGTAT CTTTGCGGCA
TCTACCAACG CTTATATCAA TACTGGCGAC GGTATTGGCA TGGCGGTACG TGCTGGTATT
CCATTGCAAG ATATGGAGTT TTGGCAGTTC CATCCAACGG GCGTTCATGG TGCCGGCGTA
CTATTGACCG AAGGTTGCCG CGGTGAAGGC GCAATCTTAC GTAATAAAGA TGGCGAAGCC
TTCATGGAGC GTTATGCGCC AACGGTTAAA GACTTGGCAC CACGCGATTT GGTTTCTCGT
TCTATGGACC AAGAAATCAA AGAAGGTCGT GGTTGTGGGC CAAATGCTGA CCATATCGTG
ATGGACATGA CGCATCTAGG TGTTGAAACC ATCATGAAGC GTCTGCCTTC AGTATTCGAG
ATTGGTAAAA ACTTTGCTAA CGTCGATATT ACTAAAGAGC CGATTCCCGT TATCCCAACC
ATTCACTACA TGATGGGCGG TATTCCAACC ACGATTCATG GTCAAGTGAT TGTACCGGAT
CTAGAGGCAG GTACTGATGA AGACGGTTTA TATGCTAAAG GTAATGTGAT TAAAGGTCTT
TATGCGATTG GTGAATGTGC GTGCGTTAGT GTCCACGGTG CCAACCGTTT AGGTACCAAC
TCACTACTAG ACCTATTGGT ATTTGGTCGT GCGGCAGGCA AGCATATCGT TGATGAGTTC
CATCATGCGG ACCATAACTA CAAGCCACTT GATCCTCGTG TCCTTGATTA TACGGTCAGT
CGTTTAGATA AGCTGCAACA GTCAACGTCA GGCTACAATG CGCAAGACGT TGCCGATGAG
ATTCGTGCGA CCATGCAAAC GCATGCTAGT GTTTTCCGTA CGCAAGCAAT GATGGACGAA
GGCGTTGCAA AAATTCTAGC GCTAGGCGAT AAGATTGATC AGATTCATTT GGCAGACAAA
TCACAAGTCT TTAACACGGC TCGTATCGAA GCCTTTGAAG TGGCAAACCT TTATGAGGTC
GCAAAAGCCA CGATGATATC TGCTGCCCAG CGTCACGAAA GTCGCGGCGC GCACAGTGTC
TCTGACTATG ACCGTCCAGA AGATGATGCA TACGCACCAA ACGGCCGTAA CGATAACGAT
TGGATGAAGC ATACCTTATG GTATTCTGAA GGCAATAAAA TCATCCATAA GCCTGTTCGT
AAAGTGCCAT TGACGGTTGA TTATATCGAA CCAAAGGTTC GCGTCTACTA A
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| Protein sequence | MATRQDNTIS NIKTLNYDAV IVGGGGSGMR ASLHLAEAGM KVAVLTKVFP TRSHTVAAQG
GIGASLGNMS NDNWHFHFYD TVKGSDWLGD QDAIEYMCRE APKVVYELEH MGMPFDRNED
GTIYQRPFGG HTSNYGEKAV QRACAAADRT GHALLHTLYQ KNLQQGTEFF IEWIALDLIK
DDAGNINGVI AIEQETGTVA VFQSPITVLA TGGAGRIFAA STNAYINTGD GIGMAVRAGI
PLQDMEFWQF HPTGVHGAGV LLTEGCRGEG AILRNKDGEA FMERYAPTVK DLAPRDLVSR
SMDQEIKEGR GCGPNADHIV MDMTHLGVET IMKRLPSVFE IGKNFANVDI TKEPIPVIPT
IHYMMGGIPT TIHGQVIVPD LEAGTDEDGL YAKGNVIKGL YAIGECACVS VHGANRLGTN
SLLDLLVFGR AAGKHIVDEF HHADHNYKPL DPRVLDYTVS RLDKLQQSTS GYNAQDVADE
IRATMQTHAS VFRTQAMMDE GVAKILALGD KIDQIHLADK SQVFNTARIE AFEVANLYEV
AKATMISAAQ RHESRGAHSV SDYDRPEDDA YAPNGRNDND WMKHTLWYSE GNKIIHKPVR
KVPLTVDYIE PKVRVY
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