Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0086 |
Symbol | thiC |
ID | 3514674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 98385 |
End bp | 100460 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637668770 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_263394 |
Protein GI | 71064667 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTATTT CAGATATTGG TTCACAAGCC TCTACGACTA CTTCGTCAAA AGCGACTGCT AAGGCAGACG CGCTAAAAAC CCCCGCCCAT CGTAGCGAAA CTGACGCCCG TTTCGAAGAA GACGCGCGCG ACTTGCATCG CATCCTTCCT GCCTCTCGTA AAGTCTATAT CGAAGGCTCA CGCCCCGATA TTCAAGTACC GATGCGTGAG ATTACCCTTG ACCCTACTCC TATCCAAGGC GTACCTGAAA GCGAGTGGGA GCAAAATCCA CCGTTTTACG TCTATGACAC CTCAGGTGTT TATACTGATC CCAATACCAC AATTGATTTG ACTAAAGGTT TACCCAAGCT GCGCGAAGAG TGGATTAAAG AGCGCGGTGA TACGGAACAA TTAAGCGGCT TATCAAGCGA TTATGGACAG GCACGTGCCC GTGATATCAG CACTGCCAAT CTGCGTTTTG CGCATATTGA TAAGCCGCGC CGTGCTAAAG CTGTTGATGG GAAAGTAGGT AACGTCACGC AAATGCATTA TGCGCGCCGT GGTATTATTA CTCCTGAAAT GGAATATATT GCCATCCGCG AAACCCAAAA GCAGCATGAA TTGACCGATA TGCGCCAGCA CGAAGGCGAG ACTTTTGGTG CGCATACGCC AGCGATTATT ACCCCTGAAT TTGTACGTAG TGAAGTTGCC GCGGGTCGCG CCATTATTCC GAACAATATT AACCATCCTG AATCTGAACC GATGATTATC GGGCGTAATT TCTTAGTGAA AATTAACGCC AATATCGGCA ACTCTGCACT GGGCTCTTCT ATTGATGAAG AAGTGTCAAA AATGACGTGG GCAACGCGTT GGGGTGCGGA TAACATCATG GATTTATCCA CCGGTAACCA CATCCATGAA ACCCGTGAAT GGTTGATTCG TAACTCACCT GTACCAATTG GTACTGTACC GATTTATCAA GCCCTAGAAA AAGTTGATGG CGTTGCCGAA GATTTAACAT GGGAGATATT CCGAGATACC TTGATTGAGC AAGCCGAGCA AGGCGTTGAT TATTTTACGA TTCATGCCGG TGTATTGCTA CGCTATGTAC CGTTGACCGC CAATCGCTTG ACCGGTATCG TCTCCCGTGG TGGCTCTATC ATGGCGCAGT GGTGTTTGGC ACATCATAAA GAAAGCTTTT TATATACCCA TTTTGAAGAC ATTTGCGAGA TTATGAAGCA GTATGATGTG GCGTTTAGCT TAGGTGATGG TTTGCGTCCG GGCTGCTTGC AAGACGCTAA TGATGAAGCG CAATTCGGTG AACTGCGTAC CCTCGGCGAG CTGACCCAAG TCGCATGGAA ACATGACGTA CAAGTCATGA TTGAAGGTCC AGGTCACGTG GCGATGAATC GTATTAAAGA AAATATGGAC TTGCAGCTTG AGACTTGTGC CGATGCACCT TTTTATACTC TAGGACCATT AACCACCGAT ATCGCACCCG GTTACGATCA TATTACCAGT GCCATTGGCG CAGCAATGAT TGGCTGGTTT GGCACTGCGA TGCTGTGTTA CGTGACGCCA AAAGAGCACT TGGGTTTGCC TAATAAAAAG GATGTCAAGG ACGGCATCAT CACTTATAAA ATCGCTGCCC ATGCCGCTGA TCTTGCCAAA GGTCATCCCG GTGCGCAGGC ACGTGATAAT GCGTTATCCA AAGCCCGTTT TGAATTCCGC TGGGATGATC AGTTTAATTT GGCGCTCGAC CCTGATACCG CGCGCGAGTT CCATGATGAA ACCTTGCCTA AAGACGCGCA CAAGTCAGCA CACTTTTGCT CCATGTGCGG TCCTAAATTT TGTTCCATGA AAATTACCCA AAACGTACGT GATTATGCTG CCGGACTAAA AACCTTAGCT GATACAAAAA ACAGCGTGTC CCCACAATCA GGTGCGCTCA ATGATGCTGA GCATTTGATT AAAAAGGTAG ATACACAGCT GGTCGAGCAA GTTGGCTCAG CAAGTGCTGA GGAGATTCAT CAAGGGATGG CAGAAATGAC AGAGAAGTAT CACAAAGAAG GTCGCCAGTT ATATAAAGAA GTATAG
|
Protein sequence | MTISDIGSQA STTTSSKATA KADALKTPAH RSETDARFEE DARDLHRILP ASRKVYIEGS RPDIQVPMRE ITLDPTPIQG VPESEWEQNP PFYVYDTSGV YTDPNTTIDL TKGLPKLREE WIKERGDTEQ LSGLSSDYGQ ARARDISTAN LRFAHIDKPR RAKAVDGKVG NVTQMHYARR GIITPEMEYI AIRETQKQHE LTDMRQHEGE TFGAHTPAII TPEFVRSEVA AGRAIIPNNI NHPESEPMII GRNFLVKINA NIGNSALGSS IDEEVSKMTW ATRWGADNIM DLSTGNHIHE TREWLIRNSP VPIGTVPIYQ ALEKVDGVAE DLTWEIFRDT LIEQAEQGVD YFTIHAGVLL RYVPLTANRL TGIVSRGGSI MAQWCLAHHK ESFLYTHFED ICEIMKQYDV AFSLGDGLRP GCLQDANDEA QFGELRTLGE LTQVAWKHDV QVMIEGPGHV AMNRIKENMD LQLETCADAP FYTLGPLTTD IAPGYDHITS AIGAAMIGWF GTAMLCYVTP KEHLGLPNKK DVKDGIITYK IAAHAADLAK GHPGAQARDN ALSKARFEFR WDDQFNLALD PDTAREFHDE TLPKDAHKSA HFCSMCGPKF CSMKITQNVR DYAAGLKTLA DTKNSVSPQS GALNDAEHLI KKVDTQLVEQ VGSASAEEIH QGMAEMTEKY HKEGRQLYKE V
|
| |