Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0068 |
Symbol | nusA |
ID | 3514156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 76010 |
End bp | 77494 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637668752 |
Product | transcription elongation factor NusA |
Protein accession | YP_263376 |
Protein GI | 71064649 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.272639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCGTG AAATCTTAAC GGTAGTAGAA ACTGTCAGTA ACGAGAAGGG CTTAAATCCT GAAGATATCT TTGAAGCAAT TGAAGATGCC TTGGTAGTCT CGACTAAGAA AAAAGTATAT ACCGATCAGC CAGAAGTAGA AGTGCGGGTC TCAATCGACC GTGCAACGGG CGATTATGAT ACTTATCGTT ATTGGACAGT GGTTGCAGAT GAAGACCATG AAATGCCTGC TTGTCAGCTT GCGATTACTG ACCTTGATCA AGACGAATGG TCAATTGGTG ATGTCAAAGA AGAGCAAATT GAGTCGATTG AATTCGGTCG TATTGCTGCC ACTCAAGCCA AACAAGTTAT CATCCAAAAG ATTCGTGAAG CTGAGCGTAA TTTAGTAGCA GATGCTTTTG AGCCACGTGT TGGCGAGATG ATGTACGGCG AAGTCAAAAA ACAAACCCGT GATGGTTACA TTATTGATTT AGGTGACAAC GCTGAAGGTT ATTTGTCACG TGATCAGATG TTGCCACGTG AGCAGCTGCG TGCAAAATCG CGTATCAATG CTATTTTGTA TCATGTGAAC CGTGAAAACC GCGGCGCACA GTTATTATTG TCACGTACGC ATCCTGAAAT GCTCTCGGCA TTGATGCAAA AAGAAGTGCC TGAGATTGCA GAACAAATCA TCGAAATTCG TAATGTCGCT CGCTTGCCGG GTACTCGTGC TAAAATAGCG GTTAAGACCA ACGATCATCG TATCGATCCG GTTGGTGCTT GTATCGGTAT GCGTGGTACA CGTATCCAAG CGGTACAGCA AGAGCTTGAT GGCGAGCGTA TTGATGTGGT GGTTTGGTCA GATGATCCTG CCCAATTTAT CATCAGCTCT TTGGAGCCCG CAGACGTAAG CAGTATCATC TTAGATGAAG ATACGCAGTC GGCTGATATT ATCTTTAGCA CCAACGATCA ATTGGCGCGT GCAATTGGCT CACAAGGTCA AAACGTACGC TTAGCCTCTG AGCTGACCGG CTATAAGCTG AATATGATGC TAGAAGAAGA GTATCAGCAG CGTCAAGCAA ACGAATCTAA AGCTTTTATT GAACTATTCT ATGAACGTCT AGAAGTGGAT AAAGACTTAG CACAAGCGCT TGTCGATATT GGTTTTACCA GTATTGAAGA AGTGGCTTAT GTACCAGTCG AAACCTTCTA CGATATCGAG GGATTAGATG ATGACGCGAT TGATATGATC CAAGAGCGTG CAAAAGAAGT GGTCATCGCA GACGAATTGG TCAAACAACA GAACATGAAA GAGCCAAGTC AAGAACTACA AGATCTTGAA GGAATGACGG TCAGTTGGGC TTATAAAATG GCTCAAAAAG ACATCATTAC CGTTGATGAC TTGGCAGAAC AAGCCGTCTT TGATTTAGAA GATATCGAAG ATTTAGATAC CGAAACCGCA GGAAAACTCA TCATGAAAGC TCGGGAATCT TGGTTCAATG AATAA
|
Protein sequence | MSREILTVVE TVSNEKGLNP EDIFEAIEDA LVVSTKKKVY TDQPEVEVRV SIDRATGDYD TYRYWTVVAD EDHEMPACQL AITDLDQDEW SIGDVKEEQI ESIEFGRIAA TQAKQVIIQK IREAERNLVA DAFEPRVGEM MYGEVKKQTR DGYIIDLGDN AEGYLSRDQM LPREQLRAKS RINAILYHVN RENRGAQLLL SRTHPEMLSA LMQKEVPEIA EQIIEIRNVA RLPGTRAKIA VKTNDHRIDP VGACIGMRGT RIQAVQQELD GERIDVVVWS DDPAQFIISS LEPADVSSII LDEDTQSADI IFSTNDQLAR AIGSQGQNVR LASELTGYKL NMMLEEEYQQ RQANESKAFI ELFYERLEVD KDLAQALVDI GFTSIEEVAY VPVETFYDIE GLDDDAIDMI QERAKEVVIA DELVKQQNMK EPSQELQDLE GMTVSWAYKM AQKDIITVDD LAEQAVFDLE DIEDLDTETA GKLIMKARES WFNE
|
| |