Gene Psyc_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0039 
Symbol 
ID3514775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp44824 
End bp45822 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content45% 
IMG OID637668721 
Productheat shock protein DnaJ 
Protein accessionYP_263347 
Protein GI71064620 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA AAAACTACTA TGACATTTTA GGGGTCAAAA AAGATGCCTC AGATGCTGAT 
ATTAAAAAAA GATACCGTAA GCTCGTCCGT CAATATCATC CGGATGTTAG CGATGCTCCA
GACGCTGATA ATAAGATTGC CGAGATTAAT AATGCTTATG AAACCATTAG AGACAAAGAC
AAGCGCGCTG AATATGATGC CATGCTAAAC AATCCATTTG CCGGTCAAGG TGGTGGTGGC
TTCGGTGGAC AGGCGGGCGG AGCCGGTCAA GGTGGTCAAC GCTGGGAGGA TATCAAAGAT
CAGTTTGGTG ATGGTGAAGC CTATGGCGAC GGGGGGTTTC GATTTGATGA TATTTTTTCG
GCATTTGGGC GCGGTGCACG CGGACAAACT AATGGACAGG CGGGCGGTCA GTCGCAATAT
GGCGGCTTTG GTAGCCAAGA TAGCAAAGGT CAAGACCAAC ATGCTGAGAT TACCGTTGAT
TTGGCTTCGG TCTATAACGG TGATGACTAC AGTATTAAGT TAAATGTTCC AATTCGTCAG
CCAAATGGCA GTGTGGACTA CGATAATAAG ACCCTTAAAA TCAAAATCCC TAAGGGCATT
ACTGATGGTA AGCAAATTAG ATTGGCTGGA CAAGGAGCGG CGGGCAGCGG TAGCGGCAAA
AACGGCGATT TATTTCTAAA AGTTAAACTC AGTCATGCGG CTAATATTCG TATCGAAGGC
GCTGACGTTT ATCAAACTGT GAATATCGCC CCATGGGAGG CGGCACTGGG TGAAAAAATT
AATGTTAGCA CGCCAGCAGG TACACTTGGT GTGACGATTC CCAAGAACAG TAAATCAGGT
AGCAACTTGC GCCTAAAAGG TAAAGGTATT CCTGCCAAAC AAGCGGGCGA TTTATACTTA
ACCTTAAATA TTGTCAATCC ACATATCAAT AGTGAAGCGG CAACCAACGC TTATGAAGCA
CTAAAACAAG CCTTTGCTGA CACCACTATT GAGCGATAA
 
Protein sequence
MAEKNYYDIL GVKKDASDAD IKKRYRKLVR QYHPDVSDAP DADNKIAEIN NAYETIRDKD 
KRAEYDAMLN NPFAGQGGGG FGGQAGGAGQ GGQRWEDIKD QFGDGEAYGD GGFRFDDIFS
AFGRGARGQT NGQAGGQSQY GGFGSQDSKG QDQHAEITVD LASVYNGDDY SIKLNVPIRQ
PNGSVDYDNK TLKIKIPKGI TDGKQIRLAG QGAAGSGSGK NGDLFLKVKL SHAANIRIEG
ADVYQTVNIA PWEAALGEKI NVSTPAGTLG VTIPKNSKSG SNLRLKGKGI PAKQAGDLYL
TLNIVNPHIN SEAATNAYEA LKQAFADTTI ER