| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2388 |
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| Symbol | |
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| ID | 5205112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2976036 |
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| End bp | 2977736 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640600651 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001281278 |
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| Protein GI | 148654185 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00758023 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000120585 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAAGA TACTACGGGT GCTCATCATC ATTGCGATGC TGATTACCGC ATATTTGTTG
GTGCTTGCTT GGCAGAAGGA CTATGCCAAT GTGCCAGCCA CATCAGCAGA CGCAGTAACC
CCTTCTGTAT CCACTTCCAC CACGGGGGCC GATATTCCGA CCACAGCTGG TGCTAGTGAT
ATACCTGCAG CCACGGCAAC TGATATCCCG TCAAGCAAAG CGGATAGCGA GAGTACAGAA
GCCAAAGCGG GAACGCTTAT CAATGTCACC ACAGACCGTT ATCAAGTTAA GATTGATCCG
GTAGGTGGCG ATGTGGTGTA CGCAGCATTG CGTGACTATA ATGCTAAATT ACACAGCGAT
AATTCGTTTG TTTTATTAGA AGACTCAGGT CAACGTGTGT ATGTGGCTCA GTCAGGTTTG
ATTGGTCCTA ATGGTATCGA TACTGCTTCT GGCCGTGCAA AATACAGCTA TCAGTCTGAT
AATTATGTGA TGCAGCCCGG TCAAAAGACG TTAACTGTAC CGCTGACTTA CAAACAAGAT
GGCGTGACCA TTACTAAGAG CTTTACCTTC ACCCAAGGCA AGTATCCTAT CCGTGTTAAT
TATAATATTA ATAACACAGG TACTCAGCCA TGGAATGGTC AAGTCTTTGC TCAATTAAAA
CGTGATAGCA GCAAAGATCC TGGTATGTCT GATAAAGGTG CCTTAAGCAT GGCGACCTAT
CTGGGCGGTG CTTGGGGTAC ACCAGATGAT GATTACAACA AGCTTAAGTT CAAAGACTTC
AATGATGGTG AGCTAACAGC AGCCAGCGAT AAAGGTTGGG TGGGTATTGT TCAGCATTAC
TTCGTATCAG CTTGGACCCC AAATAACTTT ACAGGTCAGT TCTTCAGCCG TGAAAAAGCA
GGCGATCATT TCATCGGTAT GAACAGTGAG CCCATCGTTG TTCCTGCTAA TAAGCAAAAA
GACGTTACGG CAACCTTATA TGCGGGTCCA AAAGATCAAG AATCATTGAT TGAAGTGGCA
CCTGGCTTGA ACAAAACTGT GGATTATGGC TTCTTATGGC CCATCTCAAA AGTGTTGTTC
GCTATCTTAG AAGGCATTCA CAAAGTCATA GGCAACTGGG GTTGGTCAAT TATTGCCCTA
ACCTTGCTGG TCAAGATTGC GCTTATGTGG TTCTCAAATA AGAGCTACTA TTCGATGGCT
AAGATGCGTG CTATTGCTCC ACGTCTGCAA GCCTTAAAAG AAGAGCACGG CGATGACCGT
ATGAAGATGT CACAAGAGAT GATGGCCATC TACAAAGAAG AGCAAGTTAA CCCAATGGCG
GGCTGTTTGC CAATCTTGTT ACAGATGCCT ATTTTCTTAG CCTTGTACTG GGTATTGGTT
GAGAGTGTTG AGCTACGTCA TGCGCCTTGG ATCTTATGGA TTCAAGACTT ATCAGCGATG
GATCCTTGGT TCATTTTACC TATGTTGATG GGTGCCAGTA TGTTCGCGCA GCAGATGTTC
AGTCCGCAGC CGACAGATCC TATGCAGGCT AAGGTGATGA AGTTCTTACC GATTATTTTC
ACGCTATTCA TGCTATTCTT CCCAGCAGGC TTGGTGTTGT ACTGGACTGT GAATAACCTG
TTCACTATGG GTCAGCAGTA TATCGTGAAC AAAAAAGTAG AACGTGAGCA AAGAGAAAAA
GCGGCCAAAA TGGCAAGCTA A
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| Protein sequence | MQKILRVLII IAMLITAYLL VLAWQKDYAN VPATSADAVT PSVSTSTTGA DIPTTAGASD
IPAATATDIP SSKADSESTE AKAGTLINVT TDRYQVKIDP VGGDVVYAAL RDYNAKLHSD
NSFVLLEDSG QRVYVAQSGL IGPNGIDTAS GRAKYSYQSD NYVMQPGQKT LTVPLTYKQD
GVTITKSFTF TQGKYPIRVN YNINNTGTQP WNGQVFAQLK RDSSKDPGMS DKGALSMATY
LGGAWGTPDD DYNKLKFKDF NDGELTAASD KGWVGIVQHY FVSAWTPNNF TGQFFSREKA
GDHFIGMNSE PIVVPANKQK DVTATLYAGP KDQESLIEVA PGLNKTVDYG FLWPISKVLF
AILEGIHKVI GNWGWSIIAL TLLVKIALMW FSNKSYYSMA KMRAIAPRLQ ALKEEHGDDR
MKMSQEMMAI YKEEQVNPMA GCLPILLQMP IFLALYWVLV ESVELRHAPW ILWIQDLSAM
DPWFILPMLM GASMFAQQMF SPQPTDPMQA KVMKFLPIIF TLFMLFFPAG LVLYWTVNNL
FTMGQQYIVN KKVEREQREK AAKMAS
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