| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2353 |
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| Symbol | |
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| ID | 5205122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2928847 |
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| End bp | 2930175 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640600616 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001281243 |
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| Protein GI | 148654150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCTT ATTCTGATCC CAATAAAAAG ACCCCTGATG AGGCGTCTAC TGAGCTTAAG
GTGGATGCAG CTGCTGCTAC CCAAGGCTCT GATGATTTCA AGCCTTATAC TGCCGCAGAA
ACCAAAGCCA AACCAAACTG GCTATGGGTA TTACCCCTTA TTTTATTGAC ATTGGCGGTT
GGTCTATTTG CCGGTCGTAT GTGGGGCCAA AAGCAACTTG AAGACAACAG CGCAGAAACG
CAGAGATCTG TCGTGCCTGA AGGCGGTACA GCTACTGGTA TCACTGAAAT AGAAAAGCCG
GTCAATCAAA AGCCGGTACT GACGGTTGAA ACCGTTACCC CAACTCAGTC AAGTGTGGCC
AATGACATCT CAGCAGACGG TACCATCAGT CCTGAGACTA CCTCTAGTGT GAGCGGAAAA
GTAAGTGGGG TAGCCATTGA TCAGGTTCTG GTACAAGAGG GAGCCCGAGT CAAAAAAGGA
CAGGTATTGG CCGTCTTTGA TACCGATGCC ATGCGCCAAC AAATTATTCA GTCTCAAGCT
GAGCTGGCAG AAGCTCAGTC TAGCTATGAC TTGGCCAAGC GAGATGCCGA GCGGGTACTA
CCTTTATTAG AGATTAATGC CATTAGCCAG CAAGAAGCTG ATCGTTATGT GGCCACTGCC
AATCAAGCTG CCGCTTCTGT GGCTGCCTCT AAGGCGCGCT TGAACAATCA AAACCTAAAT
ATGCAAAATG CCAAAGTAGT GGCACCCGTC AGCGGGGTCA TTAGCGAAAA AAATGCCAAT
GTTGGCAGCG TTCCTGGTCC TGAGCCTTTG TTCACCATTA TCGAGGAGGG CAAGCTTGAG
TGGCAGGCCC AAGTGGATCC TAATAAAGTG GGAGAAATCA ATATTGGTAC GCCGGTGGAA
GTGAGCCTAC CCAATAATAA GAGCGTGGCC GGTAAGGTCA CTCGTATTTC ACCCACTGCT
GAAGATGGCA GCCGCCAAAT TACTATTTAT GCCGCTTTAG CGCCTAATCC CAATGCGCGC
GCAGGGATGT ATCAACGCGG CACCTTTAAG CTTGGTAGCG ATGCCAAAGT GACCATTCCT
GTCAGTGCTG TGGTCAGTGA AGATGGCTAT GATTACGTGA TGCAGGTCAA AGCGGTGAAG
GATGAAAATC GCGACACCAT CTACCGCGTC AACCGAGTCA AAGTGAAGCT GGGTGAGCGT
CAAGGCGACC GTGTGGTTCT GCTTGAGCCG CTACAAGGTG ACGGCAATAT CGTACGTCAA
GGTGGCAGCT TCTTAAGTGA CGGTGATGTG GTAACTTTGG CCACAGCCAC ACCCGAGCCA
GCTAAGTAA
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| Protein sequence | MTSYSDPNKK TPDEASTELK VDAAAATQGS DDFKPYTAAE TKAKPNWLWV LPLILLTLAV
GLFAGRMWGQ KQLEDNSAET QRSVVPEGGT ATGITEIEKP VNQKPVLTVE TVTPTQSSVA
NDISADGTIS PETTSSVSGK VSGVAIDQVL VQEGARVKKG QVLAVFDTDA MRQQIIQSQA
ELAEAQSSYD LAKRDAERVL PLLEINAISQ QEADRYVATA NQAAASVAAS KARLNNQNLN
MQNAKVVAPV SGVISEKNAN VGSVPGPEPL FTIIEEGKLE WQAQVDPNKV GEINIGTPVE
VSLPNNKSVA GKVTRISPTA EDGSRQITIY AALAPNPNAR AGMYQRGTFK LGSDAKVTIP
VSAVVSEDGY DYVMQVKAVK DENRDTIYRV NRVKVKLGER QGDRVVLLEP LQGDGNIVRQ
GGSFLSDGDV VTLATATPEP AK
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