Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2274 |
Symbol | |
ID | 5206350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2838169 |
End bp | 2839275 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640600536 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001281164 |
Protein GI | 148654071 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.683357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC TCAAGCTACG CATCAAAGAC AAACATGCAA ACCGGCTAAA CAAACTAGCT GGGAGTGTTA ACTATGCGTG GAACTATGTT AATGCGTTAA GCTTTGAGCA TTTAAGACGC ACAGGTAAGT ACTTTTCGGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGAGAGTAT TTAGGCTTGC ACTCGCAAAC TTTGCAAGCC ATCAACGAAA CTCATTCCAA ATCTCGTAAA CAGTTTAAAA AAGCCAAACT CAACTGGCGT ACCAACCGTG TGGATACCAA ACGCAAATCG CTTGGCTGGA TACCTTTTAA GAAATCTGCC ATCAAGTATC TAAATACCAG ACAAACGGGG AAGAAAACAC TTAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCAAAA GCTTATCATT GATGTATTTG ATAGCTATAA TCTAAGCCTA TATCAAATCA ATACGCTTGA GATAGTGCAA GACAGCCGTA ACCGTTGGTA TGCCTGTATT ACCGTCAAAG ATTTTCCTAG ACATGCAAGT GGTAAAGGCA GCGTTGGTAT TGACTTAGGC TTAAAGGAAT CTGCTACCAC ATCAACGGGC GATAAACTAC AGATTAAGCA AACGCAAAAG TGGGCGAATA AATTAGCAGT CGCCCAGCGT GCAAACAATA AAAGCTGGGC AAAGGCAATA CACGCCAAAA TTAAAAACTC AAGATTAGAT GCAATACACA AATTCACCAC CAAGCTAGTT CAAAATAATG CTTTAATTGT GGTTGGTGAT GTTAAATCAC GCTCATTTAC CAATTCGATG ACCAACCTAG CTAAATCGAC ATACGATGCA GGATGGTTTG AACTCAAAAG ACAACTGGAA TACAAATGCA AGCATGCAGG TTGTCAGTTT GAGATAGTAA ATGAGAGTTA CACTACCCAG ACTTGTTCAC ACTGCCTTAA AATAAGTGAT AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT CTAGTTGTAG GAATCCCCTC GGTTTAG
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Protein sequence | MKTLKLRIKD KHANRLNKLA GSVNYAWNYV NALSFEHLRR TGKYFSAYDL SQYTKGSGEY LGLHSQTLQA INETHSKSRK QFKKAKLNWR TNRVDTKRKS LGWIPFKKSA IKYLNTRQTG KKTLKSTIQL SLCKGQKLII DVFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDFPRHAS GKGSVGIDLG LKESATTSTG DKLQIKQTQK WANKLAVAQR ANNKSWAKAI HAKIKNSRLD AIHKFTTKLV QNNALIVVGD VKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKHAGCQF EIVNESYTTQ TCSHCLKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR LVVGIPSV
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