Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2263 |
Symbol | |
ID | 5204984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2825229 |
End bp | 2826248 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600525 |
Product | porphobilinogen deaminase |
Protein accession | YP_001281153 |
Protein GI | 148654060 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAT CAGCCCACAC CACCTCATTA AAAACCCTTA ATATTGCCAC TCGTAAAAGC CCCTTAGCCA TGTGGCAGGC AGAGCACATT AAGGCACGTC TAGAGTCGCT ATACCCAGAT TTGGAGGTGA ATCTAGTGAC TATGGTTACT CAAGGTGACA AGATTTTAGA TACCCCGCTG GCGAAAATTG GCGGTAAAGG GTTGTTTGTT AAAGAGCTTG AGCAGGCATT GTATGATGGC CGTGCTGATA TTGCTGTGCA TTCATTAAAA GATGTGCCAA TGGTTTTACC TGAAGGGTTA ATCTTGGGCA CTTACTGTAA GCGTGAAACC CCAACCGATG CTTTTGTGTC AAATACCTAT GATTCACTAG ATGCGCTGCC CCAAGGTGCA GTAGTGGGTA CGGCCAGTTT GCGTCGTCAA TGTCAGATAA AGGCACATCG CCCCGACTTA ATCATTAAGT CATTGCGTGG CAATGTTCAG ACCCGTTTAA GCAAATTAGA TGCCGGCGAG TATGACGCCA TCATTTTGGC GACCAGTGGT CTAAAGCGTG TTGAATTAAG TGATCGTATC AAACAAGAGA TTGATATCGA TATCAGCTTG CCTGCCGTGG GTCAAGGCGC TTTAGCCATT GAATGTCGTA GCGATGATGA CGCGGTACTG AGCTTATTAA AGCCATTAAA CGATGGTCAA GCCCGTATTC GTCTCATGGC AGAGCGTGCC TTGAACCGCC GTTTGGAAGG GGGATGTCAG GTGCCGATTG CCGCCTTTGC TGTCATTGAA AAAGGGGCTG AAAATGACGA CACAGGGTCG CATAACAAGA CCCTATGGCT ACGTGGCCGT GTGGGTTCAG AAGATGGAAC GACTCTACTT AAAGCTGACA AGCGCATTGC TTTGATGGGT AATCAAGCCG ACCGTGAAGC ACAAGCTGAG CAATTGGGTA TAGATGTGGC AGATGAGCTG TTGTCATTGG GTGCAGATGG TATATTAGCG ACCATTTACA ACAATAAAGA CAAAGCGTGA
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Protein sequence | MTTSAHTTSL KTLNIATRKS PLAMWQAEHI KARLESLYPD LEVNLVTMVT QGDKILDTPL AKIGGKGLFV KELEQALYDG RADIAVHSLK DVPMVLPEGL ILGTYCKRET PTDAFVSNTY DSLDALPQGA VVGTASLRRQ CQIKAHRPDL IIKSLRGNVQ TRLSKLDAGE YDAIILATSG LKRVELSDRI KQEIDIDISL PAVGQGALAI ECRSDDDAVL SLLKPLNDGQ ARIRLMAERA LNRRLEGGCQ VPIAAFAVIE KGAENDDTGS HNKTLWLRGR VGSEDGTTLL KADKRIALMG NQADREAQAE QLGIDVADEL LSLGADGILA TIYNNKDKA
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