Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2240 |
Symbol | |
ID | 5205461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2783776 |
End bp | 2785914 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600487 |
Product | oligopeptidase A |
Protein accession | YP_001281130 |
Protein GI | 148654037 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCTA CCTCTTATAC CAAAGATATT GATCCAAATT TACATCTGGT CAACTTCTCT GAAGTTACCC CAGAGCAGCT CAAAAAGCAG GTAACTGATG CTTTAGCGAA AGGCACCGCT TTTTTGGATA AATTAGATAC GCAGCACAGT GCACCGGCTG AAGCTCAGCA GGCTTTGGAT GATATTATCG AGTTTGACCA TATTGGCCTA GACTTAGACC GCAGTTGGGG TATTTTGTCT CATCTTAATA GCGTGATGAG TAATGAGGAT ATCCGTGATG TGCATCATGA CTTGCTGCCT GCCCTCTCCG CCTTTGGTAC CCGTGTGGGT CAAAACAAAC CTCTATATAG CCGCTATCAA ACCATCAAAA ATGACAGCGC ATTCTTTGCA AGCTTAGAGC CTGCGCGCAA GCGTGCTATT GAGCTTGCTA TTCAAAGCTT TGAGCTGTCT GGTATTGGCC TAGCTGCCGA AGAGCAGGCC CGTTATGCTG ATATTCAAAG CCAGTTATCG ACCTTATCTG CTAAGTTCTC AGACAATATT TTGGATGCCA CACAGGCCTT TGCGCTACCT TTAAGCAATG AGCAGCTTGC CGGCATTACC GAAAGTGGTC TTGCCATGCT CAAAGCAGCA GCTGAGCAGT ATATTGCCAA GCAAGACGCC GACCCGTCGA TGCAAGATAA GCCTGAGTAT GTGGCTACCC TAGATATCCC AGTGTATCTG GCTGTGATGA CTCATGCTGA GGATCGTAAG CTGCGCGAAA TATTATACAA AGCGTATGTC ACTCGTGCCT CACAGTTTGA TAGCCACACA AACGCCAAAC AAGAGACGCT GGATAACAGC GATATCATGG CGCAGATATT GCAGTTGCGC ACTCAAAAAG CACAGCTTTT GGGCTTTGAC AACTATGCTG AAGTCTCCTT ATCACGCAAG ATGGCAGACA GTGCTGAGCA AGTAGAGCGC TTCTTACGTG ACTTGGCCAG CAAAGCTATG CCTGCTGCCG AGACTGATTT AGCACAGTTA CAAGCAGAAG CTGCTAAGCT GGGCATCGAG CAGATTCAGC CTTGGGATAC TGCCTACTTG GCCGAAAAAG TAAAACAGGC CAAATTCAAC TTATCACAAG AAGAAATCCG TCCTTATTTC CCTCTGCCTA AAGTGATTGA AGGGCTATTT ACCATTGTCA ACAAGCTGTT TGGGGTACGT GCCATAGAGC AGTCTGACAA AGTGGCACTG TGGCATAAAG ATGTGCGCTT TTATGAGCTG TTTGATAAAG ATGACAGTTT AATTGGCGGT TTCTACTTCG ATTTATATGC TCGCAGCGGT AAACGTGGCG GTGCTTGGAT GAGCGGTTTT CAGGCCCGTT ATGAGTATAC TGGCAGTACA CATGATGCTT ATAGCCAACT GCCTGTGTGC TTTATGGTGG GTAATTTCAC ACCGCCAACT GCCGATAAGC CAAGTTTATT GACCCATGAT GAAGTACTGA CCTTATTCCA TGAGTTTGGA CATGGCCTGC ATCATTTATT AACCCAAGTG AGCGTTAGTG ATGTGGCCGG CGTCAATGGC GTTGAATGGG ATGCTGTGGA GTTGCCCAGT CAGTTCTTAG AGAACTGGGC TTGGCATTCA GAGGGTATCG CACTTATTAG TGCGCATGTT GACACTGGTG AGGCGCTACC AAAAGAGCAG CTTGAGGCAC TATTGGCAGC CAAAAACTTC CAAAGCGGTA TGCAGACCTT ACGTCAAATT GAATTTGCTT TATTTGATTT GCTCATCCAT GCCCAATCAC CGGCACCCGA TTATCAGAAC ATTTTAGCGA CTTTAAATGG TGTGCGTGAT GATATTGCCA TCCTAGATAC CCCCGATTAC AACCGCTTTG CCAATGGCTT TAGTCATATC TTCGCTGGGG GCTATGCGGC AGGTTACTAC TCTTATAAAT GGGCAGAGCT ATTGTCCGCG GATGCCTTTA GCCGCTTTGA GGAAGAGGGG ATTTTTAATG CAGACACAGG TCAATCTTTC CGCGAGAATA TCTTAGCGGT AGGCGGCAGC TTGCCTGCCA AGACCAACTT TGAAGCCTTT AGAGGCCGTG AAGCCAGCAT TGAGGCACTA CTGCGTCATG GCGGCTTTAT AGATGACGAG GTGGCCTAA
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Protein sequence | MHPTSYTKDI DPNLHLVNFS EVTPEQLKKQ VTDALAKGTA FLDKLDTQHS APAEAQQALD DIIEFDHIGL DLDRSWGILS HLNSVMSNED IRDVHHDLLP ALSAFGTRVG QNKPLYSRYQ TIKNDSAFFA SLEPARKRAI ELAIQSFELS GIGLAAEEQA RYADIQSQLS TLSAKFSDNI LDATQAFALP LSNEQLAGIT ESGLAMLKAA AEQYIAKQDA DPSMQDKPEY VATLDIPVYL AVMTHAEDRK LREILYKAYV TRASQFDSHT NAKQETLDNS DIMAQILQLR TQKAQLLGFD NYAEVSLSRK MADSAEQVER FLRDLASKAM PAAETDLAQL QAEAAKLGIE QIQPWDTAYL AEKVKQAKFN LSQEEIRPYF PLPKVIEGLF TIVNKLFGVR AIEQSDKVAL WHKDVRFYEL FDKDDSLIGG FYFDLYARSG KRGGAWMSGF QARYEYTGST HDAYSQLPVC FMVGNFTPPT ADKPSLLTHD EVLTLFHEFG HGLHHLLTQV SVSDVAGVNG VEWDAVELPS QFLENWAWHS EGIALISAHV DTGEALPKEQ LEALLAAKNF QSGMQTLRQI EFALFDLLIH AQSPAPDYQN ILATLNGVRD DIAILDTPDY NRFANGFSHI FAGGYAAGYY SYKWAELLSA DAFSRFEEEG IFNADTGQSF RENILAVGGS LPAKTNFEAF RGREASIEAL LRHGGFIDDE VA
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