Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2229 |
Symbol | |
ID | 5205284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2769375 |
End bp | 2770481 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640600476 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001281119 |
Protein GI | 148654026 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.626337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACCC TCAAACTACG CATTAAAGAC AAGCACATAA AAGAGCTGAA TCGGATAAGC GGTTCGGTAA ACTTCGTGTG GAACTATGTT AATGCGCTGT GCTTTGAGCA TCTAAAACGT ACTGGTAAGT TTTTTAGTGC TTATGATCTA AGTGAGTACA CCAAAGGAAG CGGTGAGTAT TTAGGATTAC ACAGTCAGAC TTTACAAGCT ATCAATGAGA CTCACGCCAA ATCTCGTAAG CAATTTAAAA AAGCCAAACT TAACTGGCGC AGCAATCGTC CTGATGCCAA ACGTAAATCC CTTGGCTGGA TACCTTTTAA GAAATCGGCT ATTAAATACC TAAGCACAAG ACAAACAGGT AAAAAAGCAC TTAAATCAAC TCTTCAATTA TCACTATCCA AAGGTCAAAA GCTCATCATT GATATATTTG ATAGCTATAA TCTAAGCCTA TATCAAATCA ACACGCTTGA GATAGTGCAA GACAGCCGTA ATCGTTGGTA TGCGTGTATT ACCGTTAAAG ACTTTCCTAA GCAATTTAGT GGCAAAGGTA GCGTTGGTAT TGATTTGGGC TTAACAGAGT CTGCCACTAC ATCAAACGGT GACAAGCTGA CTATTAAGCA AACGCAAAAA TGGGCGAATA AATTAGCAGT AGCCCAGCGT GCTAAGAATA AAAAGCATGT CAAAGCAATA CATGCCAAAA TTAAAAATAC AAGATTAGAC TTAATTCATA AATTCACCAC CAAGCTAGTG CAGAGTAATG CCTTAATTGT GGTCGGTGAT GTTAAATCAC GCTCATTTAC AACTAAAAAG ACCAAAATGG CTAAATCGAC ATACGATGCA GGATGGTTTG AACTTAAACG ACAACTGGAA TACAAATGCA AGCATGCAGG TTGTCAGCTT GAGATCGTAA ATGAGAGTTA CACTACCCAG ACCTGCTCGT ACTGCCGCCA AGTAAGTGAC AGTAGTCCGA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT CTAGCTGTAG CAATCCCCTC GGTTTAG
|
Protein sequence | MKTLKLRIKD KHIKELNRIS GSVNFVWNYV NALCFEHLKR TGKFFSAYDL SEYTKGSGEY LGLHSQTLQA INETHAKSRK QFKKAKLNWR SNRPDAKRKS LGWIPFKKSA IKYLSTRQTG KKALKSTLQL SLSKGQKLII DIFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDFPKQFS GKGSVGIDLG LTESATTSNG DKLTIKQTQK WANKLAVAQR AKNKKHVKAI HAKIKNTRLD LIHKFTTKLV QSNALIVVGD VKSRSFTTKK TKMAKSTYDA GWFELKRQLE YKCKHAGCQL EIVNESYTTQ TCSYCRQVSD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR LAVAIPSV
|
| |