Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2226 |
Symbol | |
ID | 5205281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2766774 |
End bp | 2767538 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640600473 |
Product | LamB/YcsF family protein |
Protein accession | YP_001281116 |
Protein GI | 148654023 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTA ATTTACCTGT TAATAAACTG CAAACTATTG ATTTGAATGC AGATGTGGCT GAAGGCTGTG GCCAAGATAT TGCTTTAATG AATATTATTA GCTCTGCTAA TGTCAGCTGT GGTTTACATG CCGGCTCGTA TCAGCACATG CTTGAGACCT TAAAACTGGC CAAACAGCAT AATGTACGAG TCGGGGCACA TCCTGGCTTT GATGACAGAG ATAACTTTGG GCGCACCGCA CAGCAGCTAC CAGAAGAAGA GTGCCGTGCC CTGATTCATT ATCAGCTGGG TGCAGCAAAA GCCATGTGCG ATTTGGTTGG CGTTAAGCTA AGTTATGTCA AGCCGCATGG CGCTTTATAT AATCAGGCGG CTAAGGATGA GAAGTTGGCT AAAATTATTG TCAATGCGGT CAAAAACTTT GATCCAAGCC TAGCAATTAT GGGGCTATCG GGTAGTTACC TAATCAGCGT CGCTAAGGCT CATGGCTTAA CCTCAATCTC CGAAGTCTTT GCTGATCGTA ACTACGAAAG CGATGGCTCT TTGGTTGCCC GAAGCAAAGA CAATGCACTG ATTACCGATG CGACCCAAGC AGCCCAGCAC GCTCTACAAA TGATTACCCA AGGCATCGTG ACCAGTGTAG ATGGAGTTCA AGTACCTGTG GAAGCCCAAA GTATTTGCCT CCATGGTGAC AGTGAGCATG CTGTGCAGTT CGCAGCTGAG ATTAAGCAAA AGCTTGAGCA ACAAGGTATT CTCATTTGTA TCTGA
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Protein sequence | MTTNLPVNKL QTIDLNADVA EGCGQDIALM NIISSANVSC GLHAGSYQHM LETLKLAKQH NVRVGAHPGF DDRDNFGRTA QQLPEEECRA LIHYQLGAAK AMCDLVGVKL SYVKPHGALY NQAAKDEKLA KIIVNAVKNF DPSLAIMGLS GSYLISVAKA HGLTSISEVF ADRNYESDGS LVARSKDNAL ITDATQAAQH ALQMITQGIV TSVDGVQVPV EAQSICLHGD SEHAVQFAAE IKQKLEQQGI LICI
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