Gene PsycPRwf_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2209 
Symbol 
ID5206055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2748924 
End bp2750153 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content46% 
IMG OID640600456 
Producthypothetical protein 
Protein accessionYP_001281099 
Protein GI148654006 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAA ACTGGACACG AGAGCTGGTC ACACAGCGTG TGCTGACTGC TACTTTATTG 
GTCATTTTGT TTATTCTTTG CTTTAGAGTG GTACAGTTCT TTATTGTACC GGCTTTATGG
GCCGCTATTT TGGCCTACGT GACCTTTCCT ATTTATAATT TCTTCCATAA AAAAGTCAAA
CTTAGCCCCA ATATCAGCGC CGGTATTATG ACCGTAAGCA TCTCGCTTAT GCTAGGGGTG
CCTATTGTGT TAGGTCTTTT TGTGCTACAA CAAGAGGCCG TTAACCTATA TAGTAACTTG
TTGTACCGCA TCAAGGTTGG CTATGTTGAT GTGCCACAAG AGATCAAAAA CCTACCGGTC
ATTGGTCAGC AGATCAAAGA TATTTTGTGG GAGATTAATA AAGACCCTGA AGCCTCTTTG
AGTGCTTTTA GAGCTTGGTT GCAGTCGCAT TTGTATTATG GCAAGGTGGC GCTCGATGTG
GCCTTTAGTA CCATGGCCAA ATTGGGTATG GCGCTTATGA CCATCTTCTT CTTTTACCGA
GATGGCATCA GCCTGATTAA ACAAATTCGC CAAGCGCTGC GTAATATTAT TGGCAACCGT
ATCGACGATT ATCTAGACTC AGTAGGCTCC ACCACTCAGG CTGTGGTGTA TGGCATTGGT
CTGACCGCTT TGGCGCAGGC TTTATTGGCA GGTGTCGGTT ATTATTTTGC TGGTGCACCC
AGTCCTATCT TGTTGACTTT AATGACGTTT GTGGTGGCAT TAGTGCCCTT TGGAACCCCT
TTTGCTTGGA TGGGTGTGTC CATCTGGCTA TTAACCCAAG GCCATACGCC AGAGGCCATA
GGCTTGGCAT TATGGGGGAT GCTGGTAATC AGCTGGGTTG ATAATTTAAT TCGCCCGATT
GTTATCTCTG GTGCCACCAA AATTCCGTTT ATTATTATCT TTATTGGGGT GCTCGGTGGC
CTAACTGCCT TTGGTTTTGT GGGCTTATTC ATTGGACCTG TGGTATTGGC CATTGCGCTG
GCAGTATGGC GTGAATGGAT TAATCAGCAC CGCAATGTTA TCTTTGCGCC CTGTTATGCG
CAGCTTGATG AGCATCAGTG GAAGCCGGCC GATAGACCCA TGGCGTTAGA GATATCGCCC
AATGTGGTGA CTTTTAGCAA GTATCCCTTT GCCGATGCAC CAAAAGAGGA GCCGGATACC
TCAGATGACA AGCAGCCTCA TAATGACTAG
 
Protein sequence
MIENWTRELV TQRVLTATLL VILFILCFRV VQFFIVPALW AAILAYVTFP IYNFFHKKVK 
LSPNISAGIM TVSISLMLGV PIVLGLFVLQ QEAVNLYSNL LYRIKVGYVD VPQEIKNLPV
IGQQIKDILW EINKDPEASL SAFRAWLQSH LYYGKVALDV AFSTMAKLGM ALMTIFFFYR
DGISLIKQIR QALRNIIGNR IDDYLDSVGS TTQAVVYGIG LTALAQALLA GVGYYFAGAP
SPILLTLMTF VVALVPFGTP FAWMGVSIWL LTQGHTPEAI GLALWGMLVI SWVDNLIRPI
VISGATKIPF IIIFIGVLGG LTAFGFVGLF IGPVVLAIAL AVWREWINQH RNVIFAPCYA
QLDEHQWKPA DRPMALEISP NVVTFSKYPF ADAPKEEPDT SDDKQPHND