Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2191 |
Symbol | rph |
ID | 5205930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2727043 |
End bp | 2727759 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640600438 |
Product | ribonuclease PH |
Protein accession | YP_001281081 |
Protein GI | 148653988 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.184109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATAG ATAACCGCGA GCTTGACCAA CTGCGCACAG TGACTTTTGA GCGTAATTAC ACCAAACATG CTGAAGGCTC TGTACTGGTC TGCTTTGGTG ACACCAAAGT TTTGTGCACC GCCAGTGTGG AGGCCGGTGT GCCACGTTGG TTAAAAGGAA AGGGCCAAGG CTGGGTCACC GCAGAATACG GCATGCTACC TCGAGCCACC AATACCCGCA ACCAACGTGA AGCGGCGCGT GGTAAGCAAT CTGGCCGCAC CCAAGAGATT CAACGTCTTA TTGGACGTAG CCTACGAGCT ATGGTGGATT TAACCAAGCT TGGCGAGAAT ACCATCTATC TAGATTGTGA TGTGCTGCAA GCCGACGGTG GCACCCGTAC CGCTAGTATT ACTGGGGCAG CCATCGCCCT TATTGATGCG CTAGAGGTGC TGCAGCAAAA GAAAAAACTC AAAGCCGATC CGCTAATTGG CTTAGTGGCA GCCGTCTCTG TCGGTGTCAA AAACGGTGAG GTATTATTGG ATTTGAACTA TGAAGAAGAC TCCAGCTGTG ATACTGACTT GAACGTGGTA ATGACCCAAA AGGGTGAATT TATCGAAATC CAAGGCACAG CTGAAGAGAA GCCATTTACC CGTGCAGAAG CCGACAAAAT GCTGGCCATG GCCGAAAAAG GCATTGCCGA CTTGGTAAAA CTACAACAAA CTGCGCTGGG CTGGTAA
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Protein sequence | MRIDNRELDQ LRTVTFERNY TKHAEGSVLV CFGDTKVLCT ASVEAGVPRW LKGKGQGWVT AEYGMLPRAT NTRNQREAAR GKQSGRTQEI QRLIGRSLRA MVDLTKLGEN TIYLDCDVLQ ADGGTRTASI TGAAIALIDA LEVLQQKKKL KADPLIGLVA AVSVGVKNGE VLLDLNYEED SSCDTDLNVV MTQKGEFIEI QGTAEEKPFT RAEADKMLAM AEKGIADLVK LQQTALGW
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