| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2174 |
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| Symbol | |
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| ID | 5206795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2709194 |
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| End bp | 2710537 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640600421 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_001281064 |
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| Protein GI | 148653971 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAG ATCACGCAGT CAACCCCTCT TCCTCAGCCA GCAACCCCTT ATTCTTAGGG
TTTATGCTGT TGTCCTTCTT CTTTGGTGCC GGTAATTTAA TTTTTCCGCC TATGTTGGGG
ATGAATGCTG GGCTTAACTT TACGCCTGCA GTCATCGGTT TTATCGTTAC TGCCATTGCA
CTACCAATGC TCAGCCTCAT TGCCATTGCC AAGTCTAGTG GAGGGTTGTT GGGTTTGGGG
CGCCGAGTGC ATCCGGTATT TGCTTATGTT TTTGCCATCT TAATTTATCT GTCTATTGGT
GCGATGTACG GTATTCCGCG CGCTGCTAAC GTGGGTTATG AGATGGGCTT TCGCCACTTT
ATAAACTTGC CAGAGGGCAT AAGTCTGATT ACTTATGTGG TGGTGTTTTT TAGCGTGTGT
TATTTATGCG CCCTTAAATC AGGTCGCTTG GTGGATATCA TTGGTAAGGT ATTGACGCCG
GTACTGCTCG GGGTGATTGC ACTGCTTTGC GGTCTGGCTT TTATGCATCT GACGCCAAGC
GTGCATGCGC CCTCAGAGCA ATTTAACAGC AATCCTCTGT CATCGGGCAT TATCGAGGGC
TATTTTACGT TGGATGCGCT GGCAGGCCTG GCCTTTGGTA CGGTATTGGC CAATGCCATT
ATGGGCTCGA CTAAGGCGGC GGGTCAGGCA CCTTTGGCGC CCCAGCAGTT GGTTAAAGTG
ATGATTCAGT CCTCATTGGT GGCGGGTCTA TTTTTGGGTC TGATTTACTT TGGCCTGGCT
TGGATTGGCC GTGGTATGTA TCGTCCTGAG GGCTATGAAA ATGGAGCGGT GCTGCTATCG
AGTACTGCCA CGCAACTGAT GGGCAATGCT GGGAACGTGG CCTTTGGTAT GATTGTTATT
TTGGCCTGTT TAACCACCTG TATTGGCTTA ATTAATGCCT GTTCAAGCTT TGCCAATCAA
GTCTATCCTA AGATTGGTTA TGGCGTTTAT GTGCTCATCT TCACTGTGCT GGGTGCTTTG
TTCTCAAATC TGGGACTAGA CAGCATCTTG GCCATAGCGG TGCCCATTAT GGTATTTTTA
TATCCCATTA GTATCGCCTT AGTTCTGTTG TCTTTGATAC ATCCTATGAT TGCCAAGCAT
CCTTTGACCT ATGTGTTTGG TGTAGGAACA GCCACCTTGT TCGCCTTTAA TGACATGTTG
AGCAATTTGG TGAGCAGTCC ACTGCCTTGG CACAGCTTAA TTGAGAAGCT GCCTATGGCT
GAGCTGGGCT TAGGCTGGAT AGTACCGACC ATTTTAATGG CACTGCTGGG TTTTGTTATC
AAACGATCTG ATCAGGCAAT ATAG
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| Protein sequence | MDKDHAVNPS SSASNPLFLG FMLLSFFFGA GNLIFPPMLG MNAGLNFTPA VIGFIVTAIA
LPMLSLIAIA KSSGGLLGLG RRVHPVFAYV FAILIYLSIG AMYGIPRAAN VGYEMGFRHF
INLPEGISLI TYVVVFFSVC YLCALKSGRL VDIIGKVLTP VLLGVIALLC GLAFMHLTPS
VHAPSEQFNS NPLSSGIIEG YFTLDALAGL AFGTVLANAI MGSTKAAGQA PLAPQQLVKV
MIQSSLVAGL FLGLIYFGLA WIGRGMYRPE GYENGAVLLS STATQLMGNA GNVAFGMIVI
LACLTTCIGL INACSSFANQ VYPKIGYGVY VLIFTVLGAL FSNLGLDSIL AIAVPIMVFL
YPISIALVLL SLIHPMIAKH PLTYVFGVGT ATLFAFNDML SNLVSSPLPW HSLIEKLPMA
ELGLGWIVPT ILMALLGFVI KRSDQAI
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