Gene PsycPRwf_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2171 
Symbol 
ID5204710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2706989 
End bp2707447 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content43% 
IMG OID640600418 
ProductUspA domain-containing protein 
Protein accessionYP_001281061 
Protein GI148653968 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATA AACATATTTT GCTCGTTACT GACTTACGCT CTGATGCCGA CGTTGTTGCC 
CAAAAAGCCA AATACATTCA CTCACGTCAA CAAGATGCAC AGCTGTCAGT ACTACATATT
ATTAAAGATA CGATGGTAGG CTTTGGATAT GAAATGGTCC CTGCTGCCAG TCTTTATGAT
GAGATAGATG ATGAGCGCTG CAAAAACGCA AGAGGTGATT TGATTGAGTT TCTCAAGCGA
AACGGTCTAG ACTGCAAGAG TCAGGAAGTC ACCACCGCTA TTTCAAATAG CGAGGGTATT
ATTAACTATT GTCATAAAAA CGACGTGGAT TTAGTCATTA TCGGTCGCCA TGAGCGCCAT
GGTATCTCCG CTTGGATTAA CGGCGCGACG GTAGATGCTA TTTTGCCCAA TGTCTCTTGT
GATGTGTTGG TAGTCAGACT AGAAAAGCCG GTAAAATAA
 
Protein sequence
MSYKHILLVT DLRSDADVVA QKAKYIHSRQ QDAQLSVLHI IKDTMVGFGY EMVPAASLYD 
EIDDERCKNA RGDLIEFLKR NGLDCKSQEV TTAISNSEGI INYCHKNDVD LVIIGRHERH
GISAWINGAT VDAILPNVSC DVLVVRLEKP VK