Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2139 |
Symbol | |
ID | 5204598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2671098 |
End bp | 2671664 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640600386 |
Product | peroxiredoxin |
Protein accession | YP_001281029 |
Protein GI | 148653936 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.441627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00203852 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGTCAA TTATTAATCA AGAAATCCCT GAGTTTTCAG CTGAAGCATT CGTTAACGGT GAGTTCAAAA CCATCACTTC AGACGACGTA AAAGGCAAAT GGGCTATCTT CATGTTCTAC CCAGCAGACT TCACTTTCGT TTGCCCAACT GAACTAGAAG ACATGGCCGC TCAGTATGAA GAGCTAAAAG GCCTAGGCGT AGAAGTGTAC TCAGTATCTA CTGACACTCA TTTCACTCAC AAAGCATGGC ACGATTCTTC AGAAGCTATT GGTAAAGTAA CTTTCCCAAT GATCGGTGAC CCAACTGGCC GTATCACTCG TGGCTTCAAC GTAATGATTG AAGAAGCGGG TCTGGCTGAA CGTGGTACAT TCGTCGTAGA TCCAGACGGC AAAATCCAAG TTGCTGAAAT CCATGCAGGC GGTATCGGCC GTAGCGCAAA AGATCTAGTT CGCAAAGTAA AAGCAGCTCA ATACGTTCGT GAAAACGACG GTGAAGTATG CCCAGCTGCT TGGGAACAAG GTCAAGCAAC GCTTAAGCCA AGCCTAGACT TAGTCGGTAA AATCTAA
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Protein sequence | MASIINQEIP EFSAEAFVNG EFKTITSDDV KGKWAIFMFY PADFTFVCPT ELEDMAAQYE ELKGLGVEVY SVSTDTHFTH KAWHDSSEAI GKVTFPMIGD PTGRITRGFN VMIEEAGLAE RGTFVVDPDG KIQVAEIHAG GIGRSAKDLV RKVKAAQYVR ENDGEVCPAA WEQGQATLKP SLDLVGKI
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