| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2118 |
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| Symbol | |
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| ID | 5205409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2641593 |
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| End bp | 2642300 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640600360 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001281008 |
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| Protein GI | 148653915 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACAA ATTATGTCAA AGCCGTCTTA TTTGATTTAG ATGGTACTCT CATTGATACC
GCCGCTGATT TTATCCGTAT TATTAAGCGT ATGTCAGAGC AAAATGGCTG GCAAGTACCG
CCAAGTCAAG CCATTCGTGA GCAAGTGTCG GCCGGTGCAG GTGCTATGGT GAGCCTGATG
CTCAAGCACA ATGAGCAGCC GCTTACTGAA GAGCAGATTC AGCACTACCG CCAGCAATTT
TTGGATGAGT ATGAGGCCGA TATCTGTGTT GACAGCCAGG TGTTTACAGA GCTTGAGCCA
CTGCTAAGCT TTTATGAAAA AAGCGGCATT CCTTGGGGTA TTGTTACCAA TAAGCCGCGC
TATTTGGCCA CCAAGTTATT ACAAAGTCTT GCTCTCGATG AGCGCTGCTC AGTGCTGGTT
TGCCCCGATG ATGTGAGCAA TACCAAGCCC GACCCTGAGC CTATGTATTT GGCATTAGAG
AAGTTAGAAT TGCCACGCGG TATTGCCAAC AGTGTGATTT ATATCGGGGA TCATATCCGT
GATGTGCAAG CAGGTAGTGC AGCAGGCATG ACGACGGTTC TGGCCAGCTA TGGCTATATC
CCGCCAGAGG ACCAAGATGA CTTGGAAGCT TGGGGCGCCG ATTATATTGC CGACACGCCC
AAGGCCTTGG TAAAACTACT GCGCTCAAAG CAGTTTGATT ATTTATAA
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| Protein sequence | MSTNYVKAVL FDLDGTLIDT AADFIRIIKR MSEQNGWQVP PSQAIREQVS AGAGAMVSLM
LKHNEQPLTE EQIQHYRQQF LDEYEADICV DSQVFTELEP LLSFYEKSGI PWGIVTNKPR
YLATKLLQSL ALDERCSVLV CPDDVSNTKP DPEPMYLALE KLELPRGIAN SVIYIGDHIR
DVQAGSAAGM TTVLASYGYI PPEDQDDLEA WGADYIADTP KALVKLLRSK QFDYL
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