Gene PsycPRwf_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2111 
Symbol 
ID5206780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2634649 
End bp2636331 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content48% 
IMG OID640600353 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001281001 
Protein GI148653908 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT ATACTACCGG TTTAGGCAAA ACCGAGGCCA ATCACCAGCC GCTCACGCCC 
TTACAATTCC TAACTCGCGC CGCTTCGGTC TATCCTCATA AAACCTCTAT CATTTATGAT
GATTTAGTCA ACACGCCCAT TACCTATACC TGGTCTCAAA CCTTTGAGCG CTGCCGTAAA
TTGGCCCACG CCCTGCGCAA GCTTGGTATT GGCAAAGAAG ATACTGTGGC CATTATGGCA
CCCAATACAC CGGCCATGGT GGAAGCCGCT TTTGGAGTAC CTATGTCGCA AGGGGTACTG
TGTACTCTAA ATACGCGTTT AGACATCAAT GCCCTCACCT TTTGTTTGCA GCACTCCGAA
GCCAAAGTAT TGATCATTGA CAGCGAATAC GCTCATCATG TAGAGCTTAT AGAAGAAACC
TTCCCCAACT TAATCCTCAT TCACGCCACC GACATGACGC TGCCTGATGT GCCTGCTTTT
GGCAAAATGA GCTATGAGGC ACTCTTACAA AGCGGTGAGT TTGACTCTGA TGAGGCAATC
AGAGCCTTTG ATGGCACCAT CTATCCCACC GATGAGTGGG ATGCCATTGC TCTTAATTAC
ACTTCAGGTA CCACCGGCAA GCCCAAAGGC GTGGTCTATC ATCACCGCGG CGCTACTTTG
AATGCGCTGT CAAATATTTT AGATTGGGAC ATGCCCAAGC ATACCACCTA CTTATGGACC
TTGCCCTTGT TCCATTGTAA CGGTTGGTGT TTTCCTTGGA CAGTCGCTGA GCGTGCTGGT
ATTAACGTCT GCTTACGTCA AATCGATGCC AATTTAATCC TAAAACTCAT TGCCAAATAT
CAGATTACTC ATTACTGCGC CGCCCCCATT GTGCATAATA TGATCGCGGC AGGTGATAGC
CAGTTACAGC AAGCCATTAA CCATAATGTG AAAGGCTTTG TGGCCGGTGC GCCGCCTTCT
GAGGCCATGC TCGAGAAGAT GGAGGCGATG AACTTTAATG TCACTCATGT GTATGGTCTC
ACTGAGGTCT ACGGGCCGGT GACCATCTGT GCTGAGCATG ATGAATGGCA ACAGCTTTCG
GTGTCAGAAC GTGCTGCCAA AAAATCGCGT CAAGGTGTGG TGTCACACTT AATGAGCGGC
TTTGAGGTAT TCAAACAAGG CACCACCGAG CCGGTTGCTG CTGATGCAAC TGAGATGGGC
GAGCTGGCCT TAAAGGGCAA CATGGTTATG AAAGGCTATT TAAAAAACCC CAAAGCGACC
AAAGAGGCGT TTGCAGGCGG CTGGTTCCGT ACCGGAGACT TGGGCGTCAA ATACCCAGAT
GGCTATATCA AAATTATGGA TCGCCTAAAA GATATTATTA TCTCAGGAGG CGAGAACATC
TCAAGTATTG AGATTGAAAA CACCTTATAC AAAATGCCTG AGGTGAGTAG CTGCGGCGTG
GTGGCAGCCT CCAATGATAA GTGGGGAGAG GTGCCTGTGG CCTTCATCGA AATAGCTGAG
GGCGCAACTT TGACCCGTGA TCAGGTTATT GAGCATTGTC GTCAGCATCT GGCCAAGTTT
AAAGTGCCCA AACATGTGAT TTTCTGTGAA ATTCCTAAAA CCAGCACCGG AAAAATCCAA
AAGTTTGAGC TGCGTAATGC CGCCCAATCT ATGGCCAATG AAGAGCCCAA GGTAAAGTCT
TAG
 
Protein sequence
MTDYTTGLGK TEANHQPLTP LQFLTRAASV YPHKTSIIYD DLVNTPITYT WSQTFERCRK 
LAHALRKLGI GKEDTVAIMA PNTPAMVEAA FGVPMSQGVL CTLNTRLDIN ALTFCLQHSE
AKVLIIDSEY AHHVELIEET FPNLILIHAT DMTLPDVPAF GKMSYEALLQ SGEFDSDEAI
RAFDGTIYPT DEWDAIALNY TSGTTGKPKG VVYHHRGATL NALSNILDWD MPKHTTYLWT
LPLFHCNGWC FPWTVAERAG INVCLRQIDA NLILKLIAKY QITHYCAAPI VHNMIAAGDS
QLQQAINHNV KGFVAGAPPS EAMLEKMEAM NFNVTHVYGL TEVYGPVTIC AEHDEWQQLS
VSERAAKKSR QGVVSHLMSG FEVFKQGTTE PVAADATEMG ELALKGNMVM KGYLKNPKAT
KEAFAGGWFR TGDLGVKYPD GYIKIMDRLK DIIISGGENI SSIEIENTLY KMPEVSSCGV
VAASNDKWGE VPVAFIEIAE GATLTRDQVI EHCRQHLAKF KVPKHVIFCE IPKTSTGKIQ
KFELRNAAQS MANEEPKVKS