| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2086 |
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| Symbol | |
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| ID | 5204638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2602323 |
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| End bp | 2604542 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640600326 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001280976 |
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| Protein GI | 148653883 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAA TTATTTATAC CAAAACCGAT GAAGCGCCAG CGCTTGCCAC GTTATCACTG
CTACCTATTG TTGAAGCCTT TACGAAGACA GCAGGTATTT CTGTTGAAAC CAGCGATATT
TCAGTTGCTG CGCGTATCCT AGCTGAATTC CCAGACTATC TAACCGAAGA GCAACGTGTT
CCAGACAATC TAGCTGAGCT AGGTCGCCTG ACCCAAGATC CTAATACCAA CATCATCAAA
CTGCCAAACA TCAGTGCCTC AGTACAACAG CTTAAAGCAG CCATTAAAGA GCTTCAAGAC
AAAGGCTATG CGATTCCTGA TTTTCCAGAA GACCCAAAAA CTGAAGAAGA AGAAACGCTG
CGCAAACGCT ATGGTAAAGC TCTTGGTAGT GCCGTAAACC CAGTACTTCG CGAAGGTAAC
TCAGATCGCC GTGCACCAAA AGCGGTGAAA AACTACGCGC GCAAACATCC GCATTCAATG
GGTGAATGGA AGCAGTGGTC AAGCACGCAC GTCTCACACA TGCACAGTGG TGACTTCTAC
CACGGTGAGC AGTCTATGAC GCTAGACAAG GCGCGTAACG TACGTATGGA GCTACAACTT
GACGATGGCT CAACCAAAGT ACTTAAGCCT GAGATTGCGT TAAAAGACAA AGAAATTATC
GACTTAATGT TCATGAGCAA AAAAGCTTTG CTTGAGTTCT ATGAGCGTGA AATGGAAGAC
TGCCGCGACG CAGGTATCTT GTTCTCTTTA CACGTAAAAG CGACCATGAT GAAGGTATCT
CACCCCATCG TATTTGGTCA TGCAGTACGT ATTTATTATA AAGAAGCCTT CGAAAAACAT
GGCGAGCTGT TCGAAGAGCT TGGTATTAAC GTAAACAACG GTATGGCCGA TCTTTACGAG
AAGATCAAAA CATTGCCTGC CTCTAAGCGC GAAGAGATCG AACAAGACTT GCATGCCTGC
CAAGAACATC GCCCCCGTCT GGCCATGGTA GACTCTTCAA AAGGCATCAC CAACTTCCAT
TCTCCAAGTG ACGTTATCGT AGATGCTTCA ATGCCTGCTA TGATTCGTAA CGGCGGTAAA
ATGTGGGGTG CTGATGGCAA GATGTATGAC TGTAAAGCGG TCATGCCTGA GTCAACTTTT
GCGCGTATCT ATCAAGAGAT GATCAACTTC TGTAAATGGC ATGGTAACTT TGACCCAACC
ACTATGGGTA CGGTACCAAA CGTGGGTCTA ATGGCTCAAA AAGCAGAAGA GTACGGCTCA
CATGACAAAA CCTTTGAATC AAGTGATGCA GGCATGGCTC GTATTGTCGA TAATGAGACA
GGTGAAGTAC TGCTTGAGCA GCATGTTGAA AAAGGCGATA TCTGGCGTAT GTGTCAGGTG
AAAGATGAGC CTATCCAAGA CTGGGTAAAA CTTGCCGTTC GCCGCGCTCG TGAGTCAGAT
ACCCCTGTGG TCTTCTGGTT AGACCCTTAC CGTCCTCATG AAAATGAGCT GATTAAAAAA
GTAAAAACTT ACTTAAATGA TCATGACACG GAAAGTCTAC GCATCGAAAT CATGTCACAA
GTACGTGCAA TGCGTTATAC GCTAGAGCGT GTGGCACGTG GTCTAGACAC TATTTCAGCC
ACAGGTAACA TCCTACGCGA CTACCTGACT GATTTATTCC CAATTTTAGA GCTGGGCACC
AGTGCGAAAA TGTTATCCGT GGTACCATTA ATGAAGGGCG GCGGTCTATT TGAAACCGGT
GCTGGTGGTT CTGCGCCTAA GCACGTTCAG CAATTGCTAG AAGAAAACCA CTTACGTTGG
GACTCTTTGG GTGAATTCTT AGCGTTAACT GTGTCATTAG AGCACTTGGC CAACAACGAT
GACAATGCCA AAGCTAAGCT ATTGGCAGAG ACGCTAGACC GAGCCATTGA GAAGCTGTTA
ATTAACAACA AGTCACCTTC TCGCTCAACG GGTGAGATTG ATAACCGTGG CAGTCACTTC
TATCTGGCCA TGTACTGGGC TCAAGAGCTT GCCGCTCAGG ACAAAGACGC TGAGTTAAAA
GCTCAATTTA CGCCTGTAGC TGAGCAGCTT ACCAACAATG AAGCAACCAT CATTAAAGAA
CTTAATGAAG TACAAGGTAA GCCTGTAGAC ATTCATGGCT ACTATTTTGC TGATGAAGAT
TTGGCTCAAA AAGTTATGCG CCCAAGCAAA ACTTTTAATG AAGCTATCGC TTCTATCTAA
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| Protein sequence | MSKIIYTKTD EAPALATLSL LPIVEAFTKT AGISVETSDI SVAARILAEF PDYLTEEQRV
PDNLAELGRL TQDPNTNIIK LPNISASVQQ LKAAIKELQD KGYAIPDFPE DPKTEEEETL
RKRYGKALGS AVNPVLREGN SDRRAPKAVK NYARKHPHSM GEWKQWSSTH VSHMHSGDFY
HGEQSMTLDK ARNVRMELQL DDGSTKVLKP EIALKDKEII DLMFMSKKAL LEFYEREMED
CRDAGILFSL HVKATMMKVS HPIVFGHAVR IYYKEAFEKH GELFEELGIN VNNGMADLYE
KIKTLPASKR EEIEQDLHAC QEHRPRLAMV DSSKGITNFH SPSDVIVDAS MPAMIRNGGK
MWGADGKMYD CKAVMPESTF ARIYQEMINF CKWHGNFDPT TMGTVPNVGL MAQKAEEYGS
HDKTFESSDA GMARIVDNET GEVLLEQHVE KGDIWRMCQV KDEPIQDWVK LAVRRARESD
TPVVFWLDPY RPHENELIKK VKTYLNDHDT ESLRIEIMSQ VRAMRYTLER VARGLDTISA
TGNILRDYLT DLFPILELGT SAKMLSVVPL MKGGGLFETG AGGSAPKHVQ QLLEENHLRW
DSLGEFLALT VSLEHLANND DNAKAKLLAE TLDRAIEKLL INNKSPSRST GEIDNRGSHF
YLAMYWAQEL AAQDKDAELK AQFTPVAEQL TNNEATIIKE LNEVQGKPVD IHGYYFADED
LAQKVMRPSK TFNEAIASI
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