| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2050 |
|---|
| Symbol | |
|---|
| ID | 5206087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2557587 |
|---|
| End bp | 2558786 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640600290 |
|---|
| Product | transposase, mutator type |
|---|
| Protein accession | YP_001280940 |
|---|
| Protein GI | 148653847 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACT TTGACTTTAA CGAAGCCTTA AAAGGCATCC AAGCAGGTAA ACCTATCACA
GGCAGTGACG GGGTACTAGC TCCACTCATC AAACAGCTCA CCGAAGCTGC CTTAAATGCC
GAAATACAAA GCCACCTTGA ACAAAGTTCT ACAAGCAACC GTCGTAACGG TTACAGCAAA
AAGACCGTCA AATCAGCGGC AGGCAGCTTC GAGCTTGAAA CGCCACGAGA TCGTAACGGT
GAATATGAGC CTGTGTTGGT CAAGAAACAT CAAACTAAAC TCACCGCTGA GATCGACAGC
CGCATCCTAT CGCTATTTTC TCATGGCATG AGTTACCGTG ACATACGCCA CCACATTGCT
GAGATCTACC AACTTGAGGT CTCAGAGGCC ACCATCAGTA GCATCACTGA TGAGCTGATA
CCGCAGCTTA AAGCATGGCA ATCTCGTCCA CTCGACAGCG TTTATCCGTT TGTCTGGCTT
GATGCGATTC ACTACAAGGT CAAAGACGAA GGACGCTATG TCAGCAAAGC CATTTACACG
CTATTGGCAC TTAATACCGA AGGCAAAAAA GAACTCATTG GTCTGTACTG CTCTGAAAGC
GAAGGGGCAA ACTACTGGCT ATCTGTGCTC ACAGATTTAC ACAATCGTGG CGTACAAGAT
ATTCTCATCG CTTGTGTGGA TGGCCTAAAG GGTTTTCCTG AAGCCATCAA TGCCATCTTC
CCCAATACAG AAGTACAGCT GTGTGTGATT CACCAAATCC GTAATAGTAT CCGTTATGTA
GCTAGTCGTG ATCAAAAAGC CTTTATGCGC GATTTAAAGC CTGTTTATAA GGCAGTTAAT
AAGGAGTCAG CTGAACTGGC TCTTGATGAT TTAGAGGCTG TTTGGGGCGA TCAGTATCCG
GCGGTGATTA AGTCTTGGCG GGACAAGTGG CATTTGCTAT CTGCCTATTT TAAATATCCT
GAAGCAGTCA GAAAGCCTAT TTATACCACC AATGCGGTGG AAGCGGTACA TCGTCAGTTT
CGTAAACTCA CTAAAACCAA AGGCGCATTC CCGAATGAAA CCAGCTTGCT CAAATTGTTG
TATGTTGGTA TGTTAAATGC CAGTGCCAAG TGGACGATGC CGATTCGTAA TTGGGGACAG
ACAATGATGC AGCTGTCTAT CTATTTCCCT GGTCGATTAG ATTCGGTGAT GCGTCTTTAA
|
|---|
| Protein sequence | MQNFDFNEAL KGIQAGKPIT GSDGVLAPLI KQLTEAALNA EIQSHLEQSS TSNRRNGYSK
KTVKSAAGSF ELETPRDRNG EYEPVLVKKH QTKLTAEIDS RILSLFSHGM SYRDIRHHIA
EIYQLEVSEA TISSITDELI PQLKAWQSRP LDSVYPFVWL DAIHYKVKDE GRYVSKAIYT
LLALNTEGKK ELIGLYCSES EGANYWLSVL TDLHNRGVQD ILIACVDGLK GFPEAINAIF
PNTEVQLCVI HQIRNSIRYV ASRDQKAFMR DLKPVYKAVN KESAELALDD LEAVWGDQYP
AVIKSWRDKW HLLSAYFKYP EAVRKPIYTT NAVEAVHRQF RKLTKTKGAF PNETSLLKLL
YVGMLNASAK WTMPIRNWGQ TMMQLSIYFP GRLDSVMRL
|
|---|
| |