Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2048 |
Symbol | |
ID | 5206121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2553739 |
End bp | 2556807 |
Gene Length | 3069 bp |
Protein Length | 1022 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640600288 |
Product | DNA polymerase I |
Protein accession | YP_001280938 |
Protein GI | 148653845 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA AAACCAATAA AGACACTAAC CTCAAAACTG CCGATACCAC AACCGACACC TCCCATGCGG CATTAGATCC CAATATATTG CCGGATTTCG AGGCCATGCC TAATGTGGCA CAGATGCCTA CAGATCATAT CGATAAACAG CAGCCACCTT TTGTGCTGGT AGATGGCTCT TACTATCTGT TTCGCACTTA CCATGCGCTG CCTAAGACCA TGATGACCAC TCAAGGCCTG ACTACTAATG CCATTCGCGG CACGCTCAAT GCGCTACTCA AAGTAATGCG CCGCTATCAT CCCACCCATA TGGCCGTATG CTTTGACACT AAGTCACCCA CGTTTCGTCA CACCATGTCA GAGGAATACA AAGCCAATCG CCCAAAAATG GATCCTGAAT TGGCCGAACA AATCCCTTAT ATTCACCGTT TGGTACGGGC ACTTGGCATT CCACTGCTGC GTATTGAAGG CGCTGAGGCT GATGACATTA TCGGTACCCT GACCCACCGC GCTATTGAAG AGGGTCATCA TGTGGTCATC TCAACCGGTG ATAAAGACAT GATGCAGCTG GTCAACGACT GTGTCATATT GGAGGACAGC TTCGCCGGCA AAGTGGTCGA TGTGCCAGCG GTTGAAGAAA AATTTGGTAT TAAACCCAAT CAAATCATTG ACCTACTTAC TCTTATGGGG GATGCTTCTG ACGGCATTAA GGGTATACCT AGTGTCGGTC AAAAAACCGC AGTTAAATGG CTTAATCAGT ACCAAACCGT AGATAATATC CTTGCTAATG CTCACAACAT CAAAGGCAAA GTGGGCGAAA AGTTGGTGGA GTTTGTAGAT AATATTCCCC GTGATCGGCA GCTTGCCACC ATTGTGACCA ACCTAGATAT CGGTCAGGAC TGGGAAGACC TGCGCATTAA TACCGATAGC AGCACTTTTG TGGCTGAATT GCGAGACTTA TATAGTGAGC TTGAATTCAA AAATGAATTG GCATCATTGG ATCATCCCAA TCACCCTGCC AACTCAAGCG TCCATAGTGT GGCTGATAGC AAAGCCGATG CTGAGTCACA AGCACAAGTG GCAAAAACCC TACAACACCA AAAACAGAGC TCTATTATTG AGCATATCAA AAATAGCAAC ACGCATGACA AAGCTTGGCA CACCATCCTT GATGAGTCTG CCTTTGATAA TTTACTAAAC AAACTACAGG CAGCGCCTTA CTTTGCTGTC GATACCGAGA CCACCAGTAT CAACTGGCGT GAAGCACAGA TCGTGGGCCT GTCCTTTTCT GTGCAAGCGC ATGAGGCTTA TTATTTACCA CTGGCACATG TGGACTATAA CGAACCGCAA AAAAAGGCGA AGAACAAAAA AGAAGAAGCT GAACAAGCAA AACTACTTGC AAATGCAACA GTTGATCCGC TAATAGCCAA ACAGCTTGAC CGTGATACAG TGCTTGCCAA ATTAAAGCCT ATTTTAGAGA ACCCTAACAT TGGCAAAATC GGTCAACATC TAAAATATGA TGCTCATGTA TTGAGCAAGT ATGGTATCGA GTTAAATATG TCACCCAAAA ACTGGGAAAT GGATACCATG CTAGCAAGCT ACGTGTTAAA TGCAGCAGCT ACCCGTCACA GCATGGACGA TCTTGCCCGC CATTATTTGC ATACCCAAAC CATTAGCTTT GAAGACGTCG CGGGTAAAGG GGCTAAGCAG GTGACCTTTG ATAAAGTCGC TATTAACATT GCCAGTGACT ATGCGTGTGA AGACGCCGAT ATTACCTATC AATTGTTTGA GCTGTTCCAA GATAAGCTCA AAGATGACGC GGTCAACCAA CGCCTATTGC ATGAGCTTGA GATTCCTGTG GCACAGATAT TGTGTCAGAT GGAGTCCGAA GGCATTATGA TCAAACGCTC ATTCTTAAAC GAGTTGTCTG AGCGCTTTGA TGAAGAGATT GTTGCGCTTG AAAAGCAAGC CTACATTGAA GCCGGAGAAG CGTTTAACCT AGGCTCACCT AAGCAATTGG GTGAAATGCT GTTTGATAAG CTTGGCGTTA TTGGCGGTAA AAAAACCAAA TCGGGTCAAT ACTCAACCGG TGAGGCAGTA TTGTCAAAGA TTGAGCACCC ACTGGCTGAG ATTGCGCTAG AATATCGTAG CTTAGCTAAG CTCAAAAACA CCTATACCGA TGCACTCGAT GCGGTAGCCG ATAACGATAC TGACCGTGTG CATACCAGCT ATCATCAAGC CTTAACCAGT ACCGGTCGCC TCTCCTCTAC TGATCCAAAC TTGCAGAACA TTCCTATTCG CACCAAGACT GGCCGCTTAA TTCGCCAAGC CTTTATCGCA CCTAAAGGCC GAGTGCTACT GGCGGCGGAC TACTCACAGA TTGAGCTGCG CTTAATGGCA CATTTCTCAG GTGACGACAA CCTGACTCGC GCCTTTAATG AAGGCTTGGA CATTCATAGT GCCACAGCAG CTGAGGTGCT TGGTAAATCA GTCGATGATG TTACCCCAAC CGAGCGCCGT AACGCCAAAG CCATTAACTT TGGTTTGCTC TATGGTATGA GCGCCTTTGG TCTGGCCAAG CAAATTCAAA TGGGACGCAG TGAAGCACAA GACTATATCA ATCAGTACTT CGCACGTTAT CCTGGCGTGC AGCGTTATAT GCAAGAGACT CGAAATAGCG CGGTAGACAA TGGCTATATC GAAACCATCT TAGGGCGTAA GCTTTATACC CCAGACATTC AGCACAGCAA TCAAATGGTA CGCCGCGGCG CCGAACGTGC TGCCATTAAT GCCCCACTAC AAGGCAGTGC CGCTGATTTA ATTAAGCTTG CGATGATTGC GGTGGATAAC GTATTGCCCA AACAAAATGC CAAAATGCTA TTACAGGTGC ATGATGAATT GGTATTTGAG GTGGATGCCG ATAAGGTCGA TCACATTGCT AAGCTTATTA AAAATGCGAT GCAAAATGTA CTGAGCGATA CCGCTAAGCA GATGGGCTGG GATGTTGATT TTGCCGTACC ATTATTGGTG GAAACCGGTG TCGGTGATAA CTGGGATGAG GCGCATTAA
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Protein sequence | MTDKTNKDTN LKTADTTTDT SHAALDPNIL PDFEAMPNVA QMPTDHIDKQ QPPFVLVDGS YYLFRTYHAL PKTMMTTQGL TTNAIRGTLN ALLKVMRRYH PTHMAVCFDT KSPTFRHTMS EEYKANRPKM DPELAEQIPY IHRLVRALGI PLLRIEGAEA DDIIGTLTHR AIEEGHHVVI STGDKDMMQL VNDCVILEDS FAGKVVDVPA VEEKFGIKPN QIIDLLTLMG DASDGIKGIP SVGQKTAVKW LNQYQTVDNI LANAHNIKGK VGEKLVEFVD NIPRDRQLAT IVTNLDIGQD WEDLRINTDS STFVAELRDL YSELEFKNEL ASLDHPNHPA NSSVHSVADS KADAESQAQV AKTLQHQKQS SIIEHIKNSN THDKAWHTIL DESAFDNLLN KLQAAPYFAV DTETTSINWR EAQIVGLSFS VQAHEAYYLP LAHVDYNEPQ KKAKNKKEEA EQAKLLANAT VDPLIAKQLD RDTVLAKLKP ILENPNIGKI GQHLKYDAHV LSKYGIELNM SPKNWEMDTM LASYVLNAAA TRHSMDDLAR HYLHTQTISF EDVAGKGAKQ VTFDKVAINI ASDYACEDAD ITYQLFELFQ DKLKDDAVNQ RLLHELEIPV AQILCQMESE GIMIKRSFLN ELSERFDEEI VALEKQAYIE AGEAFNLGSP KQLGEMLFDK LGVIGGKKTK SGQYSTGEAV LSKIEHPLAE IALEYRSLAK LKNTYTDALD AVADNDTDRV HTSYHQALTS TGRLSSTDPN LQNIPIRTKT GRLIRQAFIA PKGRVLLAAD YSQIELRLMA HFSGDDNLTR AFNEGLDIHS ATAAEVLGKS VDDVTPTERR NAKAINFGLL YGMSAFGLAK QIQMGRSEAQ DYINQYFARY PGVQRYMQET RNSAVDNGYI ETILGRKLYT PDIQHSNQMV RRGAERAAIN APLQGSAADL IKLAMIAVDN VLPKQNAKML LQVHDELVFE VDADKVDHIA KLIKNAMQNV LSDTAKQMGW DVDFAVPLLV ETGVGDNWDE AH
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