Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2032 |
Symbol | |
ID | 5206437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2530521 |
End bp | 2531213 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640600267 |
Product | hypothetical protein |
Protein accession | YP_001280922 |
Protein GI | 148653829 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.488451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGT TAGGAAGTTT ATTACAGCAA GCCACAAGCC TTAGCAAAAG CGCGGGCAAA GTTGCCACAA AAGCGGCCAC TCGCCTAAAT CTGCCATTAC AAGGTGCTCA ATTAAAAGCT ACTGAGACGT CGCATCAACC TTTAGATGTG AACAACCCTT TTACCAAAAT CCTAAAAACA GTTCAGCGGT TGCCTGACAG CACTCAGTCT TTTGTATTAA CCAAAGTCTT TAGTAAGATT GTACCCTATG TGGGCACCAC AGGTATTGTC TATGAAACAG TCACGCCCAA TAAATTGGTC GTCAGCTTAA ACAATAAAAA AGGCGTGCAA AATCACATTG GCACGGTGCA CGCTGTGGCA GTAACTTTAT TGGCAGAGAC TGCCACAGGG TTTATATTAG GAGTGAACCT GCCGTCAGAT AGAGTGCTCT TGGTCAAATC TTACGAGGTA AATTTCTATC GCCCTATTAA GACAGGTCAA ATTGCCGCCA TTGCCACTTT AAGCGACGAG CAGCGCCAAT ATATATTGGA CAATGCCAAA GGTGAAATGG TCATTCCTTG TGTGATTGAA GACCGTCAAT CAGATAGCGA ACGCGCCCCG ATTACTGTTG AGATGACCTG GGCCTGGATT CCTAAATCCG AGCTAAAGCA GCGCCGTGAA GGTAAAGATA ACAGTAACTC TACTACAAAA TAA
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Protein sequence | MSQLGSLLQQ ATSLSKSAGK VATKAATRLN LPLQGAQLKA TETSHQPLDV NNPFTKILKT VQRLPDSTQS FVLTKVFSKI VPYVGTTGIV YETVTPNKLV VSLNNKKGVQ NHIGTVHAVA VTLLAETATG FILGVNLPSD RVLLVKSYEV NFYRPIKTGQ IAAIATLSDE QRQYILDNAK GEMVIPCVIE DRQSDSERAP ITVEMTWAWI PKSELKQRRE GKDNSNSTTK
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