Gene PsycPRwf_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2032 
Symbol 
ID5206437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2530521 
End bp2531213 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID640600267 
Producthypothetical protein 
Protein accessionYP_001280922 
Protein GI148653829 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.488451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGT TAGGAAGTTT ATTACAGCAA GCCACAAGCC TTAGCAAAAG CGCGGGCAAA 
GTTGCCACAA AAGCGGCCAC TCGCCTAAAT CTGCCATTAC AAGGTGCTCA ATTAAAAGCT
ACTGAGACGT CGCATCAACC TTTAGATGTG AACAACCCTT TTACCAAAAT CCTAAAAACA
GTTCAGCGGT TGCCTGACAG CACTCAGTCT TTTGTATTAA CCAAAGTCTT TAGTAAGATT
GTACCCTATG TGGGCACCAC AGGTATTGTC TATGAAACAG TCACGCCCAA TAAATTGGTC
GTCAGCTTAA ACAATAAAAA AGGCGTGCAA AATCACATTG GCACGGTGCA CGCTGTGGCA
GTAACTTTAT TGGCAGAGAC TGCCACAGGG TTTATATTAG GAGTGAACCT GCCGTCAGAT
AGAGTGCTCT TGGTCAAATC TTACGAGGTA AATTTCTATC GCCCTATTAA GACAGGTCAA
ATTGCCGCCA TTGCCACTTT AAGCGACGAG CAGCGCCAAT ATATATTGGA CAATGCCAAA
GGTGAAATGG TCATTCCTTG TGTGATTGAA GACCGTCAAT CAGATAGCGA ACGCGCCCCG
ATTACTGTTG AGATGACCTG GGCCTGGATT CCTAAATCCG AGCTAAAGCA GCGCCGTGAA
GGTAAAGATA ACAGTAACTC TACTACAAAA TAA
 
Protein sequence
MSQLGSLLQQ ATSLSKSAGK VATKAATRLN LPLQGAQLKA TETSHQPLDV NNPFTKILKT 
VQRLPDSTQS FVLTKVFSKI VPYVGTTGIV YETVTPNKLV VSLNNKKGVQ NHIGTVHAVA
VTLLAETATG FILGVNLPSD RVLLVKSYEV NFYRPIKTGQ IAAIATLSDE QRQYILDNAK
GEMVIPCVIE DRQSDSERAP ITVEMTWAWI PKSELKQRRE GKDNSNSTTK