Gene PsycPRwf_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1990 
Symbol 
ID5205944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2478455 
End bp2479261 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content50% 
IMG OID640600222 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001280880 
Protein GI148653787 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000722698 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCTCAA CTTCAGCGAC AGACAATAGC CAATATGATC GACGCTTCAA AGGCACTCAG 
ACCTTATATG GTACAAAAGG CTTTGCCAAT TTTGAAAAGG CGCATGTCAT AGTCATCGGC
GTGGGCGGTG TGGGTACTTG GGTGGCAGAA GGGCTAGCAC GTACGGCAAT TGGTCAAATG
ACTTTGATTG ATATGGATGT GTTGGTGGCC TCCAATGTCA ACCGTCAGCT GCCAGCCATG
GACAGTGGCT TTGGAAAAAG TAAGATTGAA CAGATGGCCG AGCGGGCGCG TCAGATCAAT
CCAAAGATAC AGCTCAACTT AGTTGATGAC TTCTTAACCG CAGAAAATGT CGCTCAGCTA
TTGCCAAGCC GAGAGCAGGC CAAGCAAAGC GCTGAGCAAG GGACAGCGAC CATTGTACTT
GACTGTACCG ATGACATGTC GGCAAAGCTT GCCATTGCCT TACACTGCCG ATTTAACAAA
TTAAAGTTAA TTTGTGCTGG CGGTGCTGGT GGTAAAACCG ATCCATTACA AATTACAGTG
AGTGACCTAA AAGACACCTA TCAAGATCCA TTGCTGGCAC GCCTGCGCAC CAAGCTGCGT
AATGAGCATG GCATTAATAA GGCCATGAAA GAGAAGTTCG GCATTAAATG TGTCTACTCC
ACCCAGCCGC CTATTGTCAA TAAATCAGCC GATGGTAGCG TGCAGACCGG CGGCCTACAT
TGCGGCGGTT ATGGATCTGC GGTGGCCGTC ACTTCGGTGG TGGGTATGGT CATGGTCAGT
GAGACGTTAG CGATGCTAAG CCGCTAG
 
Protein sequence
MTSTSATDNS QYDRRFKGTQ TLYGTKGFAN FEKAHVIVIG VGGVGTWVAE GLARTAIGQM 
TLIDMDVLVA SNVNRQLPAM DSGFGKSKIE QMAERARQIN PKIQLNLVDD FLTAENVAQL
LPSREQAKQS AEQGTATIVL DCTDDMSAKL AIALHCRFNK LKLICAGGAG GKTDPLQITV
SDLKDTYQDP LLARLRTKLR NEHGINKAMK EKFGIKCVYS TQPPIVNKSA DGSVQTGGLH
CGGYGSAVAV TSVVGMVMVS ETLAMLSR