| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1979 |
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| Symbol | |
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| ID | 5206494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2465179 |
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| End bp | 2467758 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600211 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001280869 |
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| Protein GI | 148653776 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.205373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAT CCGATAACAA CTATGACAGT GATTTTGAGC AGCAATTTGA AGACAACATC
GATAACGAAG TTGATTCTAC AGCCGATGCT CAAGAGTCTG ACGTAGTGAC AGATTTTGAG
CCGACGGATG TGGCACTGAG TATTGACCAA GAAGCCAGCT CGCTACCTTT GCTTGCGCTG
CGTGACGTGG TGGTTTATCC GCACATGCAA ATTGCCTTGT TTGTCGGTCG TGACCCCTCT
ATTAAAGCCA TTAACGCCGC TAAAAAAAGC CATGATGACC AAGTATTGGT CGTGGCCCAA
AAGGATTCGC TGAGCGAAGA CATCCATCAA GAGAACCTAT ATCAGTATGG TACGGTGTGC
CGTATCGTAA GCACCATGCC ACACGACAGT GATGAAAACT GTATTAAGGT GCTTATTGAA
GGCGAAAACC GCGTGCGCTT AGATAAGGTA ACCGAACAAG ACGATGGAAT GCTTGTGGGC
GACTATACCT ATAGCGCCAT TACCTTGACG ATGAATGAGT CGCAGCAAAA AAACACCTTA
GAGGCACTGC GTCAGCTGTT CGCTAACTAC GCTGAAGCTC GCCTGCGCAA TAGCCGCGAA
TTAATCCGCG TCTCTGAACG CATCGATCAC TTATTAGAGC TGGTGTATTT TATCGCCACT
CGTGTCTCTA TGGATCTTGA GGCCAAACAG CAATTGCTCG AAAAAGACGA CATCGCGCTG
CACATTAATA CCATCACTGA GTATTTGGCC AAGCAAAGTG CTGAGCAGTC GATTGAGCAA
GAAATCCAAG ATGCGGTTCG CCGTCAAATG GAGAGCAACC AGCGCGAGTA CTATTTAAAC
GAGAAGATGA AGGCCATCAA AAATGAGCTT TCTGAAATCA GTGATGGCTC TTTTGACAGT
GAAGATGATC TTGAAGAGTT AGAGGCCCGC TTAAAAGAAG CTGACCTGCC TGAAGATGTG
CGCAAAAAAG CGGAGCAAGA GTTTAAGAAG CTTAAAATGA TGCCGCCGGC GTCAAGTGAA
TCCTCAGTGG TGCGCAACTA CATCGACTGG ATCTTAGATA CCCCCTGGAA CAAAGCCAGT
AAGGTATCTA TCAAGCTTGA TAAGGCAGAA GAAGTGCTTG ATGCGGACCA CTATGGTCTA
CAAGATGTCA AAGACCGCAT CTTAGAATAT CTGGCCGTTC AATCACGCGT CAAAAAGCTA
CGTGGTCCCA TTCTTTGTCT GGTAGGTCCT CCAGGTGTGG GTAAAACCTC ACTGGGTGAA
TCTATTGCCC GAGCCACTGG CCGTAAATTT GTGCGTATGG CCTTAGGCGG CGTGCGTGAT
GAGGCAGAAA TCCGTGGTCA CCGCCGTACT TACATCGGGG CTATGCCGGG TAAAATTGTC
CAATCACTGG CCAAAGTTGA GGTAAAAAAC CCGCTATTTT TGCTTGATGA AATCGACAAA
ATGGCGCAAG ACTTCCGTGG TGATCCAGCC TCAGCACTGC TTGAAGTACT TGACCCCTCA
CAGAACGATA AGTTTAACGA CCACTATCTA GATTTGGACC TGGACTTATC GCAAGTGATG
TTTATCTGTA CCGCCAACAG CATGGACATT CCACCTGCCC TGCTCGACCG TATGGAGGTG
ATTCGTCTGC CAGGCTACAC GGAAGACGAA AAAATCAACA TCGCTGAGAA GTACTTGGTG
CCCAAAGCCA TCAAGCAAAA CGGGCTAAAA AATGACGAGA TTGAAATTGT GCCAGAAGCT
TTGCACAGCA TCGTTCAGCG TTATACCCGT GAAGCTGGTG TGCGTAATCT TGAGCGTGAG
GTCAACAAGA TTTGCCGTAA GGTGGTACGC GAGTCTATTG AGAAATATGG CGCTAAGCCG
ACCAAAAAGA CCAAGATTGA GACCGTTGTG GTAGATGCCG ATAACATCAG CGACTACTTA
GGCGTGCATC AATACGACTT TGGTCTGGCA GAAGAAGCGC CTGAAGTGGG CCGTGTCACT
GGCCTAGCTT GGACCAGCGT GGGCGGTGAG TTACTCACCA TTGAGACCAT CACTATGCCC
GGTAAAGGCG ACTTTGTGTA TACCGGATCA CTGGGTGACG TGATGAAAGA GTCTATTCGT
GCTGCGATGA GTGTGGTACG TGCCCGTGGG GAGATGATTG GCATTGACTA CGAGACCTTT
AAGTCAAAAG ATGTGCACGT ACATATGCCA GAAGGTGCCA CACCAAAAGA TGGTCCGTCA
GCCGGTATTG CCTTGACCAC CGCCTTAGTG TCTGCGATGA CTGGCATTGC CATCCGCCCA
GACATCGCTA TGACAGGCGA GGTGACCTTA CGTGGCAAAG TGCTGCGCAT TGGTGGCCTT
AAAGAGAAGC TATTAGCGGC TCACCGTGGT GGTATTAAGC ACGTGTTAAT CCCAGCCTCT
AACGAGCGTG ATCTGGTTGA GATTCCAGAT AATGTTAAAG AGGGCTTGAC CATCCAGCCG
GTATCTACCA TTGATGAGGT GCTTCAGGCG GCCTTGGTTG AGATGCCAAA GCCACTGGCT
CCCAATAAAG TTAAGGTGGC GGTAGACACG ACCAAAGCTG AGCCAGCACT ACGCAGCTAA
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| Protein sequence | MSKSDNNYDS DFEQQFEDNI DNEVDSTADA QESDVVTDFE PTDVALSIDQ EASSLPLLAL
RDVVVYPHMQ IALFVGRDPS IKAINAAKKS HDDQVLVVAQ KDSLSEDIHQ ENLYQYGTVC
RIVSTMPHDS DENCIKVLIE GENRVRLDKV TEQDDGMLVG DYTYSAITLT MNESQQKNTL
EALRQLFANY AEARLRNSRE LIRVSERIDH LLELVYFIAT RVSMDLEAKQ QLLEKDDIAL
HINTITEYLA KQSAEQSIEQ EIQDAVRRQM ESNQREYYLN EKMKAIKNEL SEISDGSFDS
EDDLEELEAR LKEADLPEDV RKKAEQEFKK LKMMPPASSE SSVVRNYIDW ILDTPWNKAS
KVSIKLDKAE EVLDADHYGL QDVKDRILEY LAVQSRVKKL RGPILCLVGP PGVGKTSLGE
SIARATGRKF VRMALGGVRD EAEIRGHRRT YIGAMPGKIV QSLAKVEVKN PLFLLDEIDK
MAQDFRGDPA SALLEVLDPS QNDKFNDHYL DLDLDLSQVM FICTANSMDI PPALLDRMEV
IRLPGYTEDE KINIAEKYLV PKAIKQNGLK NDEIEIVPEA LHSIVQRYTR EAGVRNLERE
VNKICRKVVR ESIEKYGAKP TKKTKIETVV VDADNISDYL GVHQYDFGLA EEAPEVGRVT
GLAWTSVGGE LLTIETITMP GKGDFVYTGS LGDVMKESIR AAMSVVRARG EMIGIDYETF
KSKDVHVHMP EGATPKDGPS AGIALTTALV SAMTGIAIRP DIAMTGEVTL RGKVLRIGGL
KEKLLAAHRG GIKHVLIPAS NERDLVEIPD NVKEGLTIQP VSTIDEVLQA ALVEMPKPLA
PNKVKVAVDT TKAEPALRS
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