Gene PsycPRwf_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1960 
Symbol 
ID5204834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2442694 
End bp2443287 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content45% 
IMG OID640600192 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001280850 
Protein GI148653757 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATG TATCAGGCTT TGCGCTCGGC TTATCACTCA TCTTCGCCAT TGGCTCCCAA 
AATGCCTTTA TCTTAAAGCA AGGTCTAAAA AAGCAGCACG TGTTTGCCGT ATGCCTGTTT
TGTGCCCTAT CAGATGCGCT TCTCATCTCG GCAGGGGTTG CAGGATTTGG CGCCATGACG
GCACAACATC CCAAGATTGT GAATATTGCG AAGCTTGCTG GGGCTTTATT TTTATTAGTA
TATGGTCTGC AAAGCTTATA TGCAGGCTTT ACCAAGTCGC ATGCCTTAGG CAGTAATGCC
GCCGCCGAAA GCAGCTTAAA TAGATCGCTT ATGCTGTGTT TTGGGTTTAC CTGGCTTAAT
CCACACGTGT ATTTAGATAC CTTGGTGCTG GTCGGTATGG TGTCTACTGG TGCCAATAGT
AAGCTACTAT TTGCCACCGG TGCGGTGAGT GCTTCTTTTG TGTTTTTCTT CAGCTTAGGG
TATGGCGCGC GCCTACTCGG CCCACTGTTT GCCAAGCCTA AATCTTGGAA TATTTTAGAT
GCTTTAGTGG GCGTATTAAT GCTTTATTTA TCTTGGCATC TATACAACAG TTAA
 
Protein sequence
MDYVSGFALG LSLIFAIGSQ NAFILKQGLK KQHVFAVCLF CALSDALLIS AGVAGFGAMT 
AQHPKIVNIA KLAGALFLLV YGLQSLYAGF TKSHALGSNA AAESSLNRSL MLCFGFTWLN
PHVYLDTLVL VGMVSTGANS KLLFATGAVS ASFVFFFSLG YGARLLGPLF AKPKSWNILD
ALVGVLMLYL SWHLYNS