Gene PsycPRwf_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1954 
Symbol 
ID5204828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2437007 
End bp2437954 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content46% 
IMG OID640600186 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001280844 
Protein GI148653751 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAACTG TAAATGATAG CCGCTCAGAC ACGCAGGCCT ATTCTGAGCC AAATTTAGAC 
TCAGGCGCTG GTATTAGAAT CTATACCACG CCTGTACAGT CATTGCCAGA AGACTTGTAC
ATACCACCTC AAGCTTTTGC CATTTGGCTT GATCAGTTTG AAGGCCCACT CGACTTTTTA
TTATATCTGG TCAAAAAGAA CAATTTTGAC ATCACAGACA CCGCTATTTT GCCAATTACT
GAGCAGTATT TGGCATATAT CGATGAGCTT GATGCTGATC ATTTTGAGCT GGCTGGTGAT
TATCTGCTGA TGGCTTCGAC TTTGATTGCC ATTAAGACCG AGCTATTGCT ACCGGCGCCT
GAGAAGTTAG AAGATGAGCG CGACCCGAAA GCTGAATTAA TATCTCGTCT GGAGGACTAT
GCTCAAATTA AGGAGGCTGC TCGTCGTTTG GACAATCTGA TACGTCTAGA GCGTGATGTA
TTTTTGGCAA TGGCTAGCCT GCCAGACCCT GAGGTTATGG CTGCTCAGCT ACCAAGCTAC
CCTGCTGAAA TACTGGTGGA GAGCTTATTA AAAATGCAGC TTAAACCTGA CTATCAGATG
CACAGTATCA AAGTTGATCC TATTCCCTTA TCAGATCGTA TTGCCAGCAT CAGTCGCCAG
TTAAGTGAAC GTGGTGAAGG CGCCTTTATT GAGCTTCTTG ATCAGAGTCA GGGACGTCTT
GGGGTGGTGG TCAGCTTCGT GGCTGTGCTT GAGCTAATGA AGCGTCAGAT TATTGATGTG
ATTGAGACAG ACAGCGCGTT AACAACTGCG TCTGTGCCCA TAAAACCACT CGCCACCCAT
AACATTGCCA ATACCGCACA AGATGCCGTT ACAGATGGCG CAGTACCGGC TGAGCATAAG
CCGCATACTT ATAGCCTATC AAGTTTAAAG CTGCGCTGGG TCGCTTAA
 
Protein sequence
MTTVNDSRSD TQAYSEPNLD SGAGIRIYTT PVQSLPEDLY IPPQAFAIWL DQFEGPLDFL 
LYLVKKNNFD ITDTAILPIT EQYLAYIDEL DADHFELAGD YLLMASTLIA IKTELLLPAP
EKLEDERDPK AELISRLEDY AQIKEAARRL DNLIRLERDV FLAMASLPDP EVMAAQLPSY
PAEILVESLL KMQLKPDYQM HSIKVDPIPL SDRIASISRQ LSERGEGAFI ELLDQSQGRL
GVVVSFVAVL ELMKRQIIDV IETDSALTTA SVPIKPLATH NIANTAQDAV TDGAVPAEHK
PHTYSLSSLK LRWVA