| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1936 |
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| Symbol | |
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| ID | 5204803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2402175 |
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| End bp | 2403611 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600168 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001280826 |
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| Protein GI | 148653733 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.962808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAA TAACGATAAC GACTGCAAAA ACACTTTATG ACAAACTTTG GGATGCGCAC
TTGGTCAGTC AACGTGATGA CGGTTCAAGT CTAATTTATA TTGACCGCCA CTTGTTGCAT
GAAGTGACTA GCCCGCAAGC TTTTGAAGGT TTAGCGCTGG CCAATCGTGA ACCTTGGCGT
CTATCAGCCA ATATTGCGAC GCCTGATCAT AACGTACCTA CAGTGCGCAA AGAGCGTCTT
GAAGGTGTCA GTGGTATTAA AGATGAAGTG TCTCGCTTGC AGGTCAAAAC GTTGGATGAC
AACTGCGTTA AGTTTAATAT TGCAGAGTTT ACCATCAACG ATGTGCGTCA AGGTATCGTA
CACGTAGTAG GCCCAGAGCA AGGCTTGGTA TTGCCAGGTA TGACCGTGGT ATGTGGTGAT
TCACATACGG CAACGCATGG CGCTTTAGGC TGTTTGGCTC ATGGTATTGG TACCTCTGAA
GTCGAGCACG TGTTGGCCAC TCAGTGCTTG GTTCAGAAAA AATCTAAAAA TATGCTGATC
CGTGTCAATG GTGAGCTAGG CGCTGGCGTG ACTGCCAAAG ATGTGGTGTT GGCCATTATT
GCTAAGATTG GTACGGCAGG CGGTACCGGT TATGCCATTG AGTTTGCTGG TGAGGTATTT
GAAAACATGA GCATGGAAGG CCGTATGACG GTGTGTAACA TGGCCATAGA AGCTGGTGCT
CGTGTGGGTA TGGTTGGTGT GGATGAGACC ACCATCGAAT ATGTCAAAGG CCGTCCTTTT
GCACCAACAG GTGAGCAGTG GGATCAAGCG GTTGAGTACT GGAATACCTT GCACTCAGAT
GAGGGCGCAC ATTTTGATGC GATTGTTGAG CTAGATGCCA GTGACATTGC CCCGCAAGTG
TCTTGGGGCA CGTCACCTGA AATGGTGGTG GATGTGACTC AATATGTTCC AACGTTAGCT
CAGGCAAAAG ATGAGGTGCA GGCTGAGGCA TGGGAGCGTG CTTATCAATA TATGGGTCTT
GAGCAAGGCC AGCCGATTAC CGATATCAAG CTTGATCGTA TTTTTATTGG CTCGTGTACC
AACTCTCGTA TTGAAGACTT GCGCTCAGCG GCATCGGTGA TTAAAGGCCG TAAAGTGGCA
GCCAACGTTA AAGAAGCCAT CGTGGTTGCC GGCTCGGGCC AGGTAAAACA GCAAGCGGAG
CAAGAGGGAT TAGATAAGTT GTTTATTGAG GCAGGATTTG AATGGCGTGA GCCTGGCTGC
TCAATGTGTT TGGCCATGAA TGCTGATAAG CTTGAGCCAC AAGAGCACTG CGCCTCAACC
TCAAACCGTA ACTTTGAGGG TCGTCAGGGC AATGGTGGTC GCACCCACTT AGTTAGCCCA
GCAATGGCGG CGGCGGCGGC CTTAGCCGGT CATTTTGTGG ATGTGCGAAG CTTTTAA
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| Protein sequence | MSAITITTAK TLYDKLWDAH LVSQRDDGSS LIYIDRHLLH EVTSPQAFEG LALANREPWR
LSANIATPDH NVPTVRKERL EGVSGIKDEV SRLQVKTLDD NCVKFNIAEF TINDVRQGIV
HVVGPEQGLV LPGMTVVCGD SHTATHGALG CLAHGIGTSE VEHVLATQCL VQKKSKNMLI
RVNGELGAGV TAKDVVLAII AKIGTAGGTG YAIEFAGEVF ENMSMEGRMT VCNMAIEAGA
RVGMVGVDET TIEYVKGRPF APTGEQWDQA VEYWNTLHSD EGAHFDAIVE LDASDIAPQV
SWGTSPEMVV DVTQYVPTLA QAKDEVQAEA WERAYQYMGL EQGQPITDIK LDRIFIGSCT
NSRIEDLRSA ASVIKGRKVA ANVKEAIVVA GSGQVKQQAE QEGLDKLFIE AGFEWREPGC
SMCLAMNADK LEPQEHCAST SNRNFEGRQG NGGRTHLVSP AMAAAAALAG HFVDVRSF
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