Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1912 |
Symbol | |
ID | 5205229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2375362 |
End bp | 2376069 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640600143 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001280802 |
Protein GI | 148653709 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000376024 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC CCAACACCCT TAATTTAAAT ACCCGCGAAC AAAAAAAGAT GCAGACCCGA CAAGCATTTT TTAACGCGGT GCTTGATTTG TGTATGATGG GTCAATCCTT TGCCTCCATT AGTTTGCGCC AAGTGACTCG TGAGGTGGGG GTTGTGCCTA CTGCCTTTTA TCGTCATTTT GATGATATGG AAAGCTTGGG CAGAAGCTTA GTAGAAGAAG AGCTTGGTGA AGCCTTATCT ACCTTACGTA ATGGTTTGCA AATGGGGCGC ACGCGCAGCT TTGATCGTCA AATTGCCAAT AGCATTCAAC TATTTTTTGC CTCAATTGAT GAGCACCCTC GCTATTGGCA GTTTTTAGTC AGTGAGCGCT TTGGTGGCTC AGAGTCAGTG CGCAACGCCA TTGCTGCCCA AATTAAGCTA TTTGCTAAAA TTATGGGCGA AGATTTAGGC ATACAGCCGG CGTTTAGTCA TATCAACTCC GAAGACAGAC GCTTGTTGGC TGAGGCTGGG CTCAATTTAT TTTTGACGTG GATTATTGAT TGGCTGGATC TGACCTATTC ACAAGCACAC GATGAAGAAA GCGACTTAAC AGGCGTCAGT GCTAAAAAAG ATTTGATGCT TAGACAATGC ACACGCCAAG CACAAATGCT GTTCTATGGT GCAGAGAATT GGCGCTCTAA TGAGGCCACC TTGTTGCCTA ATGATTAA
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Protein sequence | MTTPNTLNLN TREQKKMQTR QAFFNAVLDL CMMGQSFASI SLRQVTREVG VVPTAFYRHF DDMESLGRSL VEEELGEALS TLRNGLQMGR TRSFDRQIAN SIQLFFASID EHPRYWQFLV SERFGGSESV RNAIAAQIKL FAKIMGEDLG IQPAFSHINS EDRRLLAEAG LNLFLTWIID WLDLTYSQAH DEESDLTGVS AKKDLMLRQC TRQAQMLFYG AENWRSNEAT LLPND
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