| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1884 |
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| Symbol | |
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| ID | 5206548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2342450 |
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| End bp | 2343529 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600115 |
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| Product | twitching motility protein |
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| Protein accession | YP_001280774 |
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| Protein GI | 148653681 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAAG GGATAGATGA GGTGACACAC GCTCACGCTT TAGATTCACT CACTGCGCTA
CTACGCCATA CTCAAAGCTT AAAGGCTTCA GATCTGCACC TGTCAGCAGG AATGCCCGCC
ATGCTGCGAA TCGATGGGGA GATAACCTCG ACCAACCTAC CCGCCTTAAC GCATACCCAA
ATTCAGCAGT ATATTGCCAG CACCTTAAGC CCTGCGCAAA TGAGTGAATT TGAACAGCAC
ATGACATTGG ACTATGCGTT GGATGTGGCC GATGTGGGGC GATTTCGGGT CAATATATTT
CAGCAGCACC GAGGTATTGC AGCTGTATTT CGTGCCATCC CCGATGCCCT ATTGTCTTTG
CAGCAGCTCG ACTTATCCAG TGATAATAAG GCCACCTTGC AACAAATAAC CCAGCTCAAT
CATGGGCTGG TATTGGTCAC CGGCCCCACC GGCTGCGGAA AATCAACCAC AGTGGCCGCT
TTGGTTGATC ATATTAACCA AACACGCGCC GCCCACATTC TGACCATCGA AGACCCCATT
GAATTTATTT ATCACGCCAA AAAAAGCTTA ATCAATCAGC GGGAAGTGGC GCGTCATACC
GCAGATTATA CGAAGGCCCT ACGCTCAGCT TTGCGTGAAG ATCCCGACGT TATTGTGATT
GGTGAGCTGC GTGATTTGGC CAGTATACGT TTGGCGCTTA CTGCAGCTGA GACCGGGCAT
TTGGTACTGG CAACGCTACA TACCCGCTCT GCGATTAAAA GCATCGACAG AATTGTGGAT
GTATTTGCAG CCCATGAAAA GGACATGATC CGATTTTTGT TGTCCGAATC GCTACAAGCT
GTGATCTCGC AAATATTAAT TAAGCGCCCT GAGGGAGGAC GAATAGCCGC TCACGAGATT
ATGATGGCCA CCCCTGCCAT CTGTAACATG ATTCGCCAAA ACAAACTGGC ACAAATGTAT
TCCGCCATTC AAACTGGCCA CAGCCAAGGC ATGCAGACTC TAGACCAAGC GCTCACCGAT
CTAATCCAGC GCAAACTTAT TAGCCCACAT AGCGCTCAGC ATCATGCCAA ATTATGCTAG
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| Protein sequence | MIQGIDEVTH AHALDSLTAL LRHTQSLKAS DLHLSAGMPA MLRIDGEITS TNLPALTHTQ
IQQYIASTLS PAQMSEFEQH MTLDYALDVA DVGRFRVNIF QQHRGIAAVF RAIPDALLSL
QQLDLSSDNK ATLQQITQLN HGLVLVTGPT GCGKSTTVAA LVDHINQTRA AHILTIEDPI
EFIYHAKKSL INQREVARHT ADYTKALRSA LREDPDVIVI GELRDLASIR LALTAAETGH
LVLATLHTRS AIKSIDRIVD VFAAHEKDMI RFLLSESLQA VISQILIKRP EGGRIAAHEI
MMATPAICNM IRQNKLAQMY SAIQTGHSQG MQTLDQALTD LIQRKLISPH SAQHHAKLC
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