| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1861 |
|---|
| Symbol | |
|---|
| ID | 5205002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2315611 |
|---|
| End bp | 2317740 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640600092 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_001280751 |
|---|
| Protein GI | 148653658 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000111702 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00673824 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTG CAACCCCCCT AAACCGATAT CGTAATATTG GTATTTCAGC ACACATTGAT
GCTGGTAAAA CAACCACAAC TGAACGTATC TTATTCTATA CCGGTGTGAG CCACAAAATT
GGTGAAACTC ACGAAGGTTC AGCAACCATG GACTGGATGG AACAAGAACA AGAGCGTGGT
ATTACTATTA CCTCAGCTGC GACCACTTGT TTCTGGTCAG GTATGGGTCA ACAGTTCCCA
CAGCACCGCA TCAACATCAT TGACACCCCA GGCCACGTTG ACTTCACAAT TGAAGTAGAA
CGTTCAATGC GTGTACTTGA TGGTGCATGT ATGGTTTATT GTGCGGTTGG TGGTGTACAG
CCTCAGTCTG AGACTGTATG GCGTCAGGCT AACAAATATA AAGTACCTCG TTTAGCGTTC
GTTAACAAAA TGGACCGCGT TGGTGCTGAT TTCTACCGTG TTAAAGAACA AGTTAAAACT
CGCCTAGGCG GTAACCCAGT TGCTATGGTT ATCCCAATTG GTAAAGAAGA TGACTTTGAA
GGTGTTATTG ACTTAATCAC CATGAAAGCT ATCTACTGGG ATGTTGAATC TCTAGGTATG
AAGTTTGAAG AGCGTGAGAT TCCTGAAGAG CTTCAAGAAA AAGCTGAAGA GTATCGCAGT
GAGCTTGTAG AAGTAGCTGC TGAAGCTAAC GAAGACTTGA TGAATAAGTA CTTAGAAGGC
GAAGAGCTAA CTGAAGACGA AATTCATGCG GCTATCCGTC AGCGTACTAT TAATAACGAA
ATCATTCCAA TGTACTGTGG TACTGCCTTC AAAAACAAAG GCGTACAAAA GATGTTGGAT
GCCGTGATTC AATATATGCC AGCACCTCAA GACGTACCTG CTATTAAAGG TATCCTTGAT
GACAAAGCAG AAACTGAAGG CACTCGTGAA GCGTCTGATG ATGCGCCATT TGCTGCCCTT
GCGTTCAAAA TCATGAACGA CAAATTCGTT GGTAACTTAA CCTTCGTACG TGTTTACTCA
GGTGTTATCA AGCAAGGTGA GAGCGTTTAT AACCCAGTTA AGATGAAGCG TGAGCGTATC
GGCCGTATCG TACAGATGCA TGCTGACTCA CAGCAAGAGC TTGACGAAAT CCGTGCCGGT
GACATCGCTG CCCTAGTTGG TATGAAAGAT GTTGGTACTG GTGACACGCT ATGTGATGAA
AAAGAAATCA TTACTCTTGA GCGTATGGAA TTCCCAGAGC CAGTAATCAG TCTAGCTGTT
GAGCCTAAGA CTAAAGCTGA CCAAGAAAAA ATGTCTATCG CTCTTGGCCG TTTGGCTAAA
GAAGATCCTT CATTCCGTGT TCACACCGAT GAAGAATCAG GTCAGACTAT CATCAGTGGT
ATGGGTGAGC TTCACTTAGA AATCCTTGTT GACCGTATGA AGCGTGAATT CAAGGTTGAA
GCTAACATCG GTGCACCACA AGTTGCTTAC CGTGAAACTA TCCGCGGTAC AGTTGAGCAA
GAAGGTAAGT TTGTTCGTCA GACAGGTGGT CGTGGTAAGT TCGGTCATGT GTGGTTAAAA
CTTGAGCCTC TAGATCTAGA CTCAGGTGTT GATTACCAAT TCGAAGAACA AGTAGTTGGT
GGTGTTGTAC CTAAAGAGTA CCATGGCGCA GTTGATAAAG GTATTCAAGA GCGCATGAAG
AACGGTATCC TTGCAGGTTA CCCAATCGTT GGTGTTAAAG CGACATTATA TGATGGTTCA
TACCATGATG TTGACTCTGA CGAATTATCG TTCAAAATGG CCGGTTCTAT TGCCTTCAAA
AAAGGCTTCA TGAACGCCAA TCCAGTACTT CTTGAGCCTG TCATGAAAGT TGAAGTTGAG
ACTCCAGAAG AATACATGGG TGATATCATG GGTGACTTAA ACCGTCGTCG TGGTATGGTT
CAAGGTATGG ACGATCTACC TGGTGGCACT AAACAAATCC GTGCTGAAGT ACCATTAGCT
GAAATGTTTG GCTATGCAAC TAACGTACGT TCTATGTCTC AGGGCCGTGC AACATACTCA
ATGGAATTCC AAAAGTATGC TGAAACGCCT AAGTCTGTAG CCGAAGAGAT TATGAAGAAA
TTCTCTGGCA AGGATGATGA CGAAGAGTAG
|
|---|
| Protein sequence | MARATPLNRY RNIGISAHID AGKTTTTERI LFYTGVSHKI GETHEGSATM DWMEQEQERG
ITITSAATTC FWSGMGQQFP QHRINIIDTP GHVDFTIEVE RSMRVLDGAC MVYCAVGGVQ
PQSETVWRQA NKYKVPRLAF VNKMDRVGAD FYRVKEQVKT RLGGNPVAMV IPIGKEDDFE
GVIDLITMKA IYWDVESLGM KFEEREIPEE LQEKAEEYRS ELVEVAAEAN EDLMNKYLEG
EELTEDEIHA AIRQRTINNE IIPMYCGTAF KNKGVQKMLD AVIQYMPAPQ DVPAIKGILD
DKAETEGTRE ASDDAPFAAL AFKIMNDKFV GNLTFVRVYS GVIKQGESVY NPVKMKRERI
GRIVQMHADS QQELDEIRAG DIAALVGMKD VGTGDTLCDE KEIITLERME FPEPVISLAV
EPKTKADQEK MSIALGRLAK EDPSFRVHTD EESGQTIISG MGELHLEILV DRMKREFKVE
ANIGAPQVAY RETIRGTVEQ EGKFVRQTGG RGKFGHVWLK LEPLDLDSGV DYQFEEQVVG
GVVPKEYHGA VDKGIQERMK NGILAGYPIV GVKATLYDGS YHDVDSDELS FKMAGSIAFK
KGFMNANPVL LEPVMKVEVE TPEEYMGDIM GDLNRRRGMV QGMDDLPGGT KQIRAEVPLA
EMFGYATNVR SMSQGRATYS MEFQKYAETP KSVAEEIMKK FSGKDDDEE
|
|---|
| |