| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1860 |
|---|
| Symbol | |
|---|
| ID | 5205001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2314125 |
|---|
| End bp | 2315315 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640600091 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_001280750 |
|---|
| Protein GI | 148653657 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000159791 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00222583 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG CCAAGTTCGA ACGTAACAAG CCGCACGTAA ACGTCGGTAC CATCGGTCAC
GTTGACCACG GTAAAACCAC TCTAACAGCT GCTATCGCAA CTGTAGCTGC AAAAACTTTT
GGTGGCGAAG CCAAAGACTA CGCTGCAATT GACTCAGCAC CAGAAGAAAA AGCCCGTGGT
ATTACAATCA ACACCTCACA CATTGAGTAT GACACTGCTG ACCGTCACTA CGCACACGTA
GACTGCCCAG GTCACGCTGA CTATGTTAAA AACATGATCA CTGGTGCTGC TCAGATGGAC
GGTGCTATTC TAGTCGTATC AGCTACTGAC GGCCCAATGC CACAAACTCG TGAGCACATC
TTGTTATCAC GTCAGGTTGG CGTACCATAC ATCATGGTAT TCATGAACAA ATGTGACATG
GTTGACGACG AAGAACTACT AGAGCTAGTA GAGATGGAAG TACGTGAATT ACTTTCAGAC
TACGACTTCC CAGGTGATGA CACACCAATC ATCAAAGGTT CAGCTTTAGA AGCCCTAAAC
GGTAAAGATG GCAAATATGG TGAGCCAGCA GTTATCGAAT TATTACAAAC TCTAGACACT
TACATTCCAG AGCCAGAGCG TGACATCGAT AAGCCATTCT TGATGCCTAT CGAAGACGTA
TTCTCAATCT CAGGTCGTGG TACTGTTGTA ACTGGCCGTG TTGAGTCTGG TATCGTTAAA
GTTGGTGACG AGATTGAAAT CGTTGGTATC CGTGACACTC AAAAAACTAC CTGTACAGGT
GTTGAGATGT TCCGTAAGCT ACTAGACGAA GGTCGTGCTG GTGAGAACTG TGGTGTACTA
CTACGTGGTA CTAAGCGTGA AGACGTACAA CGTGGCCAAG TACTAGCTAA GCCAGGTTCA
ATCACTCCAC ACACTAAGTT TGACGCTGAA GTATACGTAC TATCAAAAGA AGAGGGTGGT
CGTCACACAC CATTCCTAAA CGGCTATCGT CCACAGTTCT ACTTCCGTAC AACTGACGTA
ACTGGTGCTA TTTCTCTACA AGAAGGTACT GAAATGGTAA TGCCAGGCGA TAACGTTGAG
ATGAGCGTAG AGCTTATCCA CCCAATCGCT ATGGACAAAG GTCTACGTTT CGCAATCCGC
GAAGGTGGCC GTACTGTAGG TGCTGGTGTT GTTGCTAACG TTAAAGACTA A
|
|---|
| Protein sequence | MAKAKFERNK PHVNVGTIGH VDHGKTTLTA AIATVAAKTF GGEAKDYAAI DSAPEEKARG
ITINTSHIEY DTADRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSATD GPMPQTREHI
LLSRQVGVPY IMVFMNKCDM VDDEELLELV EMEVRELLSD YDFPGDDTPI IKGSALEALN
GKDGKYGEPA VIELLQTLDT YIPEPERDID KPFLMPIEDV FSISGRGTVV TGRVESGIVK
VGDEIEIVGI RDTQKTTCTG VEMFRKLLDE GRAGENCGVL LRGTKREDVQ RGQVLAKPGS
ITPHTKFDAE VYVLSKEEGG RHTPFLNGYR PQFYFRTTDV TGAISLQEGT EMVMPGDNVE
MSVELIHPIA MDKGLRFAIR EGGRTVGAGV VANVKD
|
|---|
| |