| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1838 |
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| Symbol | |
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| ID | 5205860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2285569 |
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| End bp | 2286900 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640600069 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001280728 |
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| Protein GI | 148653635 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.858327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000675364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGATTCAT CACGACAATT ATTATTGGGT ACTTTGGTAT TTCTGGGAGG CGGCACTTTA
CTGTTTGCCA TGGTGAATCA GATGGGTACC CCAAGTGACA GTCAAGTAGA GCAAACACCG
GTGGCGCAAG TAAGCACCGA TAAAAGCACC GCGCAGTCAC CAATGACAGC AGATGTGGCC
ACTGAAGAGC GTATCTTGGC CCAAAAGCGT CTTGAGCGTG AAAAAAAGAT GTCTGAGCTT
GATCAGCGTA CCCGTGAGTT CTTGACTGAG CAAGAAAAAG CGGAAGCGTT GGCGATGCAA
AAAGCGCGCC TTGAAAACGA ACAGTATCGC AATAACAGCG CTGCTGAACC GGTCACTGAT
GGCTCACCTG CCGATGAAGC GGGCTCTGAA GTTACGGTGA CCAAACCTGT GGTAAAGGCC
CGACCGGTTG AGACAGTAGT CGCTCAAGTC ACTCCAACGC CGGCAACGCA GACCCAAGCT
ACCTCCGCGA CGCAAACAAA TACGGCTAAG GCTCAAGACA GCTCAAAGCC TGAACCCAAA
AAGGTGGCCA CTCAACAGGC ACCAAGTAGC ACCCAAAAGC ATACCGTACA GCGTGGAGAG
GGGCTTATTA AATTAGCGCG CCAATACAAT GTGCCGGTTG AGGCCATTTC ACAGGCCAAT
AAATTATCCC ATAATGCCTC TATTCGAGTG GGTCAAACCC TTACCATTCC TTCACGCAGT
CAAGTTGATC GTTTAGTAAG TGAGTACAAT GCCAGCAGTA ATAAGAGCGC TGCTGCACCT
ACCAAAGCGG CTGTGACCTC TAAGCCGGTG GTAACCAGTA CTGGGCCCAC CAGTCAAAAA
GGTCATGAGG TCAAAGCAGG TGAGGGACTT ATTAAGCTGG CGCGTCAATA TAATGTACCG
GTAGAGGCCT TAGCCGAAGC CAATAACATG AGTACCAATA CGTCGCTTAA AGTGGGTCAG
ACAGTTACCA TCCCCTCGCG TAAGCAAGTA GAAAGACTGC AGCGTGAAGC GCAGCAAAAA
CAAGCCGCAG AACAAAAAAA GCGTGAGGCG CAGCAGCGTC TAGCAGATGC ACGCCGTAAA
GCTGCCAGTG GAGAGGCTAA GGGTACCTTT GGAGTGCAAG TGGCGCTGGC TGATAATCAG
AAAAAAGCCG ATGACATCGT CAAGCAACTG CGTGCTGCCG GCTACCGAGC AACCACCAGT
AATACCAGTA AAGGTGTGCG GGTGATTGTT GGTCCCGAAA AGGGCAAAGA AGCGGCCTTG
GCGTTAAAAG ACAAAATCAA TGCCGACTCG CGTACGGATG TGGACAATGC TTGGGTGCTT
TATTGGCGCT AA
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| Protein sequence | MDSSRQLLLG TLVFLGGGTL LFAMVNQMGT PSDSQVEQTP VAQVSTDKST AQSPMTADVA
TEERILAQKR LEREKKMSEL DQRTREFLTE QEKAEALAMQ KARLENEQYR NNSAAEPVTD
GSPADEAGSE VTVTKPVVKA RPVETVVAQV TPTPATQTQA TSATQTNTAK AQDSSKPEPK
KVATQQAPSS TQKHTVQRGE GLIKLARQYN VPVEAISQAN KLSHNASIRV GQTLTIPSRS
QVDRLVSEYN ASSNKSAAAP TKAAVTSKPV VTSTGPTSQK GHEVKAGEGL IKLARQYNVP
VEALAEANNM STNTSLKVGQ TVTIPSRKQV ERLQREAQQK QAAEQKKREA QQRLADARRK
AASGEAKGTF GVQVALADNQ KKADDIVKQL RAAGYRATTS NTSKGVRVIV GPEKGKEAAL
ALKDKINADS RTDVDNAWVL YWR
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