Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1797 |
Symbol | |
ID | 5205064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2229349 |
End bp | 2230788 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640600022 |
Product | putative membrane-associated zinc metalloprotease |
Protein accession | YP_001280687 |
Protein GI | 148653594 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.88903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAAT TAATGACCAT GTTATTGTTC TTTTTGGCTT TTGTGGCCAT ATTAGGGCCA CTGGTCGCTC TGCACGAGTG GGGGCACTAT ATTGTGGCAC GTATGTGCGG CGTAAAAGTG CTGACTTACT CTATCGGCTT TGGGCCAAAG CTTGCCAGCT GGACCAGCAA AAAAACCGGT ATTAATTATC GTCTCTCAGC ACTGCCGTTA GGCGGCTATG TGAAGATGCT AGATGAGCGA GAAGGGGCAG TGGCTGAGCA TGAAAAGCAC TTGGCCTTTA ATAATCAGCA TCCGCTAAAA AAGATTGCTA TTGTGGCGGC GGGGCCCGTG ATGAATTTTA TCATCGCCAT TGCGCTGTTC TCAGTGCTGT TTTTGGTGCC AAGCGAGCAG CTTAATACCC GAATAGGCTC AATTTTACCG GACACGCCGG CCGCTACCGT TAACTTGCCC AAAGGCGACA AAATTATTGC CGTTGACGGA CACAAGGTTC AAACTTGGGA AGAGATTAAT TACCGCTTGG CCGATCGTAT GGGTGAAAGC GGTGCCGTGG GGGTTACCTT ACAACAAGTC GCGCCAAGCA CCGATACCCA GACAGCGGCG CTCTCCTATG CTGCACGCTC TGAGACGATG CAGGTTGAGA TACCCATTAA GAACTTTATG CAGGGCGAAG ACTCAGGAAA AGACACGTTA ACCAGTCTTG GGGTGATGCC TTGGCAGCCG CACATTGAGC CCATCATCGG TCAATTGACT CAGGATGGTG CCGCCATTCG TCAGGGTATG AAGGTCGGCG ATAAGATAGT GGCCATCAAT GATCAGCCTA TTAATGATTG GCTGGATGCG ACCCGTATTA TCCGTGCCAA TCCAGAAACC TTGCTAAGCT TCAAGGTGCT ACGAAAGGAT GCGCAAGGAC TTGAAAAACC TGTCATGCTT CAAATTATGC CCCAAGGCAA AAAAGCGACC GCCGGTCAGA CATATGGTCA AATTGGGGCA GGCGTGAGCC CGGTTGAGAT TGTAGTACCC GATGATTATA AAACGATGGT ATCCTACGAC CCTATCAGTG CAGTAGGTAA AGCCTTTGCT AAGACCGGTC AGCTGGCGAC CATGACCTTA AATTCTATGG GTAAAATGAT CACAGGTAAG GTGGGACTTG ATAACTTATC CGGTCCAATA ACCATTGCCG TTATCAGTAA ACAAAGCTTT GAAATCAGTT GGGAGCAAGT GCTGGCCAAC GCCGGCCTTA TCAGCCTAAG CTTGGCTGTG CTAAATCTGC TACCCATTCC GGTATTAGAT GGCGGTCACT TATTATATTA CTTAATAGAG CTGATTCGAG GTAAGCCGGT GTCAGAAAGA ATGCAAATTA TTGGCTTTAA TATGGGCTTT TTGTTCTTGC TGGCGTTTAT GATATTGGCA ATTACCAATG ACTTTAGTCG TTATTTTTAA
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Protein sequence | MSQLMTMLLF FLAFVAILGP LVALHEWGHY IVARMCGVKV LTYSIGFGPK LASWTSKKTG INYRLSALPL GGYVKMLDER EGAVAEHEKH LAFNNQHPLK KIAIVAAGPV MNFIIAIALF SVLFLVPSEQ LNTRIGSILP DTPAATVNLP KGDKIIAVDG HKVQTWEEIN YRLADRMGES GAVGVTLQQV APSTDTQTAA LSYAARSETM QVEIPIKNFM QGEDSGKDTL TSLGVMPWQP HIEPIIGQLT QDGAAIRQGM KVGDKIVAIN DQPINDWLDA TRIIRANPET LLSFKVLRKD AQGLEKPVML QIMPQGKKAT AGQTYGQIGA GVSPVEIVVP DDYKTMVSYD PISAVGKAFA KTGQLATMTL NSMGKMITGK VGLDNLSGPI TIAVISKQSF EISWEQVLAN AGLISLSLAV LNLLPIPVLD GGHLLYYLIE LIRGKPVSER MQIIGFNMGF LFLLAFMILA ITNDFSRYF
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