| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1776 |
|---|
| Symbol | |
|---|
| ID | 5206184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2201822 |
|---|
| End bp | 2202823 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640600001 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001280666 |
|---|
| Protein GI | 148653573 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA CTCCTTTATC TTTTTTAGAC TTAGCCCCTA TCCCTGAGGG TCAAACCACT
GCTCAGGGGG TGGCTTATAC CGTGGATATG GCACAAAAGG CAGAAGCCAT TGGCCTAAAC
CGCTTTTGGA TGGCAGAACA TCACAATATG CCTGGTATCG CCAGTGCCGC AACGTCAGTA
CTGCTCTCGC ATATTGGTGC TAAAACCAAC AAAATCCGTA TCGGCTCAGG TGGTGTCATG
CTGCCAAACC ACGCGCCGTT GGTAATAGCT GAGCAGTTCG GTACACTGCA TGCTTTATAT
GGGGATCGTA TTGACTTGGG ATTGGGCCGC GCGCCTGGCA CAGATGGGGC AACCTTTCGA
GCACTGCGCC GTCAGATGCA CGATGCCGAT CGCTTTCCAC AAGATGTGCA GGAGCTGATG
TTCTTTTTGG GTAGCGACTC AGACAACAGT CCGGTTCAGT CCTTCCCAGG TGCTCATAGC
AAGGTGCCAG TTTGGATTTT AGGCTCATCA CTGTTTGGTG CCACCTTAGC GGCTAAGCTT
GGCTTGCCTT ATTCATTTGC CTCACATTTT GCGCCGCGTA TGATGACGCA GGCCATTACC
ACGTATCGCG AAAACTTTGA ACCCTCACAG TATTTGGATA AGCCGTATGT GATGCTTGCG
GCCAATATGC TACTTGCAGA TGATGATGCC ACGGCTCGCT ATCATTTTAC CTCTGCACAG
CAAAGCTTTG TGCGCTTACG CCGTGGTGGC CGTGGTCAAG TACCCGCGCC CGTAGAGTCG
ATGGACAGTA TCTGGAGCGC CCCTGAAAAA GCCATGGTCG ATGATGCCTT AGCGGTATCT
TTTATTGGCA GTGTTGGACG CGTGCGTCCT CTATTACAGC ATTTCTTGGA GGAGCATAAG
CCTGATGAGC TGATGGTCAC TGCTAATATT TATGATCAGC AGGCGCGCCT GCACTCTTTG
GACTTGGTAC CTGAGCTTGA GATTTTCGAT TTAAATCCCT AA
|
|---|
| Protein sequence | MSATPLSFLD LAPIPEGQTT AQGVAYTVDM AQKAEAIGLN RFWMAEHHNM PGIASAATSV
LLSHIGAKTN KIRIGSGGVM LPNHAPLVIA EQFGTLHALY GDRIDLGLGR APGTDGATFR
ALRRQMHDAD RFPQDVQELM FFLGSDSDNS PVQSFPGAHS KVPVWILGSS LFGATLAAKL
GLPYSFASHF APRMMTQAIT TYRENFEPSQ YLDKPYVMLA ANMLLADDDA TARYHFTSAQ
QSFVRLRRGG RGQVPAPVES MDSIWSAPEK AMVDDALAVS FIGSVGRVRP LLQHFLEEHK
PDELMVTANI YDQQARLHSL DLVPELEIFD LNP
|
|---|
| |