Gene PsycPRwf_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1773 
Symbol 
ID5206181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2195483 
End bp2197375 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content45% 
IMG OID640599998 
Productmajor facilitator transporter 
Protein accessionYP_001280663 
Protein GI148653570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTAT CGACCCCTAC TAAACGCAGC TCAAAAGCTG AGTTGTCCCC TGCCAAAAAA 
TCTTGGCTTG ACTCTTTAAA GGCTTTTAAA GACCTGCGCG TCCTTATTAT GTTCTTTTTA
GGGTTCGCCG CCGGCTTGCC CATTATGCTG ATTTTCTCAA GCTTGGGGCT TTGGCTGAAT
GAAGCAGGTG TGGATCTGAG TATCATCACC ATGTTTAGTT GGGCAGGTCT TGGCTATGCG
TTTAAATTCA TCTGGGCGCC GCTTATTGAT GCAATCCCTG TACCGATACT GACCAACTGG
TTAGGGCGTC GCCGAGCATG GATGGTGGTC GCGCAGTTGC TGATTATTTT GGCCATTTAT
TTGATGGCCA GTGTCAACCC TGCTGAGGTA AATGTGCTGC ACTTAATGGC TGCCGGATCG
GTACTATTAG GCTTTGCCGC AGCAACGCAA GATATCGTCA TTGATGCGTA CCGTATTGAG
CTTGCCCCGC CTGAAATGCA GCCGGTATTG TCCTCTATCT ATGTTACCGG CTACCGCATC
GGTATGATTG TCGCCGGTGC TGGATCTTTA TATCTGGCCG TATACTTTGG CTCTACTGAA
ACGGCATATA GCTATGAGGC ATGGCGTAAT ACTTACTATG TTATGGCGCT GATCATGACC
CTGCCTTTAC TGACGACCTT TGCCGGCTAC GAGCCGACCG CTGAGATTCT ACAGATCAAA
AAACAACAGC TTAACCTCAA GCTGTTCTCT ATTTACTCGG CGATTTTATT GGTACCAGGT
ACTTTAATTG GGCTGCCGTA TTTAATAGAA ACCTTGTATA ACAGACTGTC AGGTAGCAGT
ATGGTGTTGG TGCCTAAAAC GGTTTACCCG CTACTAAATA ACTATTTTGC TGTGGCCATC
GCGGCTGCAC CTTTGTTATT GCTGTTTTTG TTTATCAATC AGCCAAAAAT TATTAATAAA
GCGCCCACTG TGACCGAGTC CAAAAACGAC TATCTCAGAT TGGTATTGGT ATTTGTACTA
TCCGTGGTGG TATTCGTGGC CGGTTATAAC CTTATTGGTA AAGTACTTCC TGAGTTCGAA
GATGCGCTGG CGGCCTTTTT AATCGCCACA CTTCGCTTAT TGGCAAGCTT AGGATTGGCA
ATTATCAGCG GTTTATTGTT GGTAAAAGTG GGCCTGGTCA AAAAAGAAGT GGCGATGGCC
ACTTGGATTA ATCCTATCTT AGATTTTTTC CGCCGCTATG GCAAAAAGGC CTTGCTACTT
TTGGCACTAA TTGGCCTGTA TCGTATCTCA GATATCGTCG CTGGCGTCAT CTCAAACGTG
TTTTATCAAG AGATGGGCTT TGATAAAACC CAAATCGCCG ATGCGGTGAA GTTAGTTGGG
GTTATTATGG CGATTGTCGG CGGCTTCTTA GGCGGTATGT TGGCCCAAAG AATGCGCATC
ATGCAGGTGA TGATGCTCGG TGCTATCTTG GCATCCTCTA CCAACTTGTT ATTCATCTTG
CTGACTTACC ATCAAGGCAG TGCTGAGTAT ATGTATTTTG CGGTCATTGT CGATAACTTG
GCATCAGGCT TTGCCAGTAT GGTGTTTATT GCCTTCTTAT CGGCGTTAAC CTCGATTAAA
TTTACGGCGG TTCAGTACGC GATTTTTTCA TCGATTATGA CCCTAATTCC TAAGGTAATG
GGTGGCTATT CAGGCTCTAT TGTAGAGGCG ACCAGCTGGC CGTTCTTCTT TACCTTTACC
TTTGTTATTG GTATTCCGAT TTTAGTGCTG ATCTATTTGG TAGATAAGTA TATCGTGATT
GGCGGTAATG ATGACATTTA TGGTGACGAT GTGGCAGCCA GTCAGCTGGC GCTTGATGAT
ACTGCCAACA CTCAGCCTGA AAGTAAAAAA TAA
 
Protein sequence
MSVSTPTKRS SKAELSPAKK SWLDSLKAFK DLRVLIMFFL GFAAGLPIML IFSSLGLWLN 
EAGVDLSIIT MFSWAGLGYA FKFIWAPLID AIPVPILTNW LGRRRAWMVV AQLLIILAIY
LMASVNPAEV NVLHLMAAGS VLLGFAAATQ DIVIDAYRIE LAPPEMQPVL SSIYVTGYRI
GMIVAGAGSL YLAVYFGSTE TAYSYEAWRN TYYVMALIMT LPLLTTFAGY EPTAEILQIK
KQQLNLKLFS IYSAILLVPG TLIGLPYLIE TLYNRLSGSS MVLVPKTVYP LLNNYFAVAI
AAAPLLLLFL FINQPKIINK APTVTESKND YLRLVLVFVL SVVVFVAGYN LIGKVLPEFE
DALAAFLIAT LRLLASLGLA IISGLLLVKV GLVKKEVAMA TWINPILDFF RRYGKKALLL
LALIGLYRIS DIVAGVISNV FYQEMGFDKT QIADAVKLVG VIMAIVGGFL GGMLAQRMRI
MQVMMLGAIL ASSTNLLFIL LTYHQGSAEY MYFAVIVDNL ASGFASMVFI AFLSALTSIK
FTAVQYAIFS SIMTLIPKVM GGYSGSIVEA TSWPFFFTFT FVIGIPILVL IYLVDKYIVI
GGNDDIYGDD VAASQLALDD TANTQPESKK