Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1773 |
Symbol | |
ID | 5206181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2195483 |
End bp | 2197375 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640599998 |
Product | major facilitator transporter |
Protein accession | YP_001280663 |
Protein GI | 148653570 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTAT CGACCCCTAC TAAACGCAGC TCAAAAGCTG AGTTGTCCCC TGCCAAAAAA TCTTGGCTTG ACTCTTTAAA GGCTTTTAAA GACCTGCGCG TCCTTATTAT GTTCTTTTTA GGGTTCGCCG CCGGCTTGCC CATTATGCTG ATTTTCTCAA GCTTGGGGCT TTGGCTGAAT GAAGCAGGTG TGGATCTGAG TATCATCACC ATGTTTAGTT GGGCAGGTCT TGGCTATGCG TTTAAATTCA TCTGGGCGCC GCTTATTGAT GCAATCCCTG TACCGATACT GACCAACTGG TTAGGGCGTC GCCGAGCATG GATGGTGGTC GCGCAGTTGC TGATTATTTT GGCCATTTAT TTGATGGCCA GTGTCAACCC TGCTGAGGTA AATGTGCTGC ACTTAATGGC TGCCGGATCG GTACTATTAG GCTTTGCCGC AGCAACGCAA GATATCGTCA TTGATGCGTA CCGTATTGAG CTTGCCCCGC CTGAAATGCA GCCGGTATTG TCCTCTATCT ATGTTACCGG CTACCGCATC GGTATGATTG TCGCCGGTGC TGGATCTTTA TATCTGGCCG TATACTTTGG CTCTACTGAA ACGGCATATA GCTATGAGGC ATGGCGTAAT ACTTACTATG TTATGGCGCT GATCATGACC CTGCCTTTAC TGACGACCTT TGCCGGCTAC GAGCCGACCG CTGAGATTCT ACAGATCAAA AAACAACAGC TTAACCTCAA GCTGTTCTCT ATTTACTCGG CGATTTTATT GGTACCAGGT ACTTTAATTG GGCTGCCGTA TTTAATAGAA ACCTTGTATA ACAGACTGTC AGGTAGCAGT ATGGTGTTGG TGCCTAAAAC GGTTTACCCG CTACTAAATA ACTATTTTGC TGTGGCCATC GCGGCTGCAC CTTTGTTATT GCTGTTTTTG TTTATCAATC AGCCAAAAAT TATTAATAAA GCGCCCACTG TGACCGAGTC CAAAAACGAC TATCTCAGAT TGGTATTGGT ATTTGTACTA TCCGTGGTGG TATTCGTGGC CGGTTATAAC CTTATTGGTA AAGTACTTCC TGAGTTCGAA GATGCGCTGG CGGCCTTTTT AATCGCCACA CTTCGCTTAT TGGCAAGCTT AGGATTGGCA ATTATCAGCG GTTTATTGTT GGTAAAAGTG GGCCTGGTCA AAAAAGAAGT GGCGATGGCC ACTTGGATTA ATCCTATCTT AGATTTTTTC CGCCGCTATG GCAAAAAGGC CTTGCTACTT TTGGCACTAA TTGGCCTGTA TCGTATCTCA GATATCGTCG CTGGCGTCAT CTCAAACGTG TTTTATCAAG AGATGGGCTT TGATAAAACC CAAATCGCCG ATGCGGTGAA GTTAGTTGGG GTTATTATGG CGATTGTCGG CGGCTTCTTA GGCGGTATGT TGGCCCAAAG AATGCGCATC ATGCAGGTGA TGATGCTCGG TGCTATCTTG GCATCCTCTA CCAACTTGTT ATTCATCTTG CTGACTTACC ATCAAGGCAG TGCTGAGTAT ATGTATTTTG CGGTCATTGT CGATAACTTG GCATCAGGCT TTGCCAGTAT GGTGTTTATT GCCTTCTTAT CGGCGTTAAC CTCGATTAAA TTTACGGCGG TTCAGTACGC GATTTTTTCA TCGATTATGA CCCTAATTCC TAAGGTAATG GGTGGCTATT CAGGCTCTAT TGTAGAGGCG ACCAGCTGGC CGTTCTTCTT TACCTTTACC TTTGTTATTG GTATTCCGAT TTTAGTGCTG ATCTATTTGG TAGATAAGTA TATCGTGATT GGCGGTAATG ATGACATTTA TGGTGACGAT GTGGCAGCCA GTCAGCTGGC GCTTGATGAT ACTGCCAACA CTCAGCCTGA AAGTAAAAAA TAA
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Protein sequence | MSVSTPTKRS SKAELSPAKK SWLDSLKAFK DLRVLIMFFL GFAAGLPIML IFSSLGLWLN EAGVDLSIIT MFSWAGLGYA FKFIWAPLID AIPVPILTNW LGRRRAWMVV AQLLIILAIY LMASVNPAEV NVLHLMAAGS VLLGFAAATQ DIVIDAYRIE LAPPEMQPVL SSIYVTGYRI GMIVAGAGSL YLAVYFGSTE TAYSYEAWRN TYYVMALIMT LPLLTTFAGY EPTAEILQIK KQQLNLKLFS IYSAILLVPG TLIGLPYLIE TLYNRLSGSS MVLVPKTVYP LLNNYFAVAI AAAPLLLLFL FINQPKIINK APTVTESKND YLRLVLVFVL SVVVFVAGYN LIGKVLPEFE DALAAFLIAT LRLLASLGLA IISGLLLVKV GLVKKEVAMA TWINPILDFF RRYGKKALLL LALIGLYRIS DIVAGVISNV FYQEMGFDKT QIADAVKLVG VIMAIVGGFL GGMLAQRMRI MQVMMLGAIL ASSTNLLFIL LTYHQGSAEY MYFAVIVDNL ASGFASMVFI AFLSALTSIK FTAVQYAIFS SIMTLIPKVM GGYSGSIVEA TSWPFFFTFT FVIGIPILVL IYLVDKYIVI GGNDDIYGDD VAASQLALDD TANTQPESKK
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