Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1771 |
Symbol | rlmL |
ID | 5206179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2191977 |
End bp | 2194400 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640599996 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_001280661 |
Protein GI | 148653568 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCC CCGAAAACAC CCTTGTAACA CCTAACACAT CAGACACCAT ACCGACGGCT TCCGCTGCCA AGCGCTATGA TATTGTCGTA ACCTGCGCTG ATGGCCTAGA GGCACCGCTG CAGACTGAGC TTAGCCACAT GGATATTAGC CATGAGCTAA AAAGTACCGG CCGTATTGCG GTCAATGCCA CCTTAGAGCA AATCTATAAA ATCTGCTTGT GGTCACGCGT CGCCTCGCGC GTGTTATTGC CGATCAAAAA GCGCAATATC AATAAAGAGT ATGACGTCGC CGAACAGCTA AATGGTCTGG CGCGTACAGT GGACTGGACT GAGTGGTTTG AGTTAGACAA TACCTTTGCT ATCCGAATGA GTGTCGATAA AAGGGTTCAA GTTAGCCAGC AGTTTGCCAT GCTGCGTATT AAAGATGCCA TCGCTGATAC TTTTAGCGAA AAGCTCGATG CCCGCCCTGA TGTCGATAGC AATAATCCTG ACTTCCCTAT CTATGCTACC GTCAATGAAA AACAGGCCGA GATTTTCTTA GATTTATCCG GAACCAGCCT ACACCGCCGC GGTTACCGTG TGGCCATGAC CGATGCCCCG CTTAAAGAAA ACTTAGCGGC CGGCTTGTTA TATACCGTAG GCTGGCACAA AACCAAAAAC AGCTATAGTG CGCTTATTGA CCCCATGTGT GGCTCCGGTA CGTTTATCAT TGAAGCGCTA TTAATGCACT GTGATTATCC GGTGGGCATT GATAAAGCCG AATCTCAATT TGGTTTTTAT AACTGGCAAG AGCATGACAG CGAGTTATGG CAGCAATGTG TGGTACAGGC CCAAGAGCGC TTCCATAATG GACTACAAAA AGCTGCAGCC GGTAAATTAC CGACTATTTT AGGCTTCGAT GCCGATGCTG GCGCCATAAA AGCGGTACAT AAAAACTTAA TCGCCGCAGG TTTAATTGAA CTGATTCCGC ATTTAACGCT AGAGCAGCGT CCGCTGTCAC AGCTAAAGAT AGCTTTGGCC AAACCGCTAT TAGACCGTAA GCTAAAACGT CCTTTGGTTA TTACCAACCC GCCTTATGGC GAGCGTTTGG GCGAAAGTGA CTTTATTAAG CCCTTGTATC AAGGCCTAGG TTTGACCTTG CAAGAGATTT TCGCCAAACA AAAATACCAG CCCATGCTAG GTCTGCTTGC CGCTCATGTC GAGCAAGCTG ACGTGCTGCC TATTGAAGAC CCGCAAACTT TGCGCTGTCA TAATGGCGCC ATTACCGTGT ATTTCCGTCA TGGTCAGCTG ATCCGCAAAG AGGGCGAAAG CCTAATCACC CGCTTTGAGA AAACCGAAAT TAAAGTGGAT GAAGCGCAAG ATTTCGTCAA CCGTCTGCAA AAGAATGTGA ACCATCTAAA AAAACTGGCT GCCAAAGAAG ATGTGACCAA CTTGCGTGTT TATGATGCAG ATTTGCCCGA CTATAAAGTG GCCATTGATG TTTATGGCGA CTATGTCCAT GTGCAAGAGT GGGCTCCGCC GAAGAGTATT CCACCAGAAA CTGCTCGCAA ACGCTTTAAT CTTGCGCTCA TGGGTATCCG TGAAGTGTTT GGCATCAACC GAGAGCAAAT CTTTATCAAG ACCCGTGCTC GACAAGTGGG TAACACTCAA TATGGCAACC CTGAAGCCAG CGCTCAATCT AAAGAGTCAA AAAATGCCCC AGAGCCTAAA AAGGACAACC GCAATCGCTA TAAAGGCAAT AAGTTTCAGC AAGCCCGTGA AGAGGCCAAG CGCCAAGAAG CTCAGCGTCT GGCACAAAAG AAACGTAAAA TGCATGTGGT GCAAGAAGAC GGCGCTTACT TTTATGTTAA CTTCACTGAC TACCTAGATA CTGGGCTGTT TATTGATCAC CGCAATATGC GTAGTATGAT TCGCTCTGCC AGCCGCGGTG CGGATGTATT AAACCTATTC GCTTATACCT GTACTGCCAG TGTTCACGCC GCACTTGGCG GGGCAAAATC AGTGACCAGT GTCGATTTAT CACAAAACTA TCTGGACTGG GGCAAACAAA ACTTTGCGCT AAATGGTCTA GATGTGACCA CCAGCCGTTA TCAGTTTATT GCCTCTGATA TCTTTGACTG GATTAAAGAC AATACCGATC AGTTTGATGT GATATTTATT GATCCACCAA CGTTCTCAAA CTCAAAGAAG TTCCAAGGGA CATTTGATGT GCAACGTGAC CACACAGCGC TGATTAACCG TGCGATGAAC CGTTTGGCTA ATGGTGGTGT GATTTACTTC TCTAATAACT TTACTAAGTT TGAGTTAGAT GAAGAGCTAT ATGATCGTTA TGAAGTCACT GAGATTACCA GTGAAACCAT TGGTTTTGAC TTTAATCCCA AAAAGCCTAT TCACCACAGC TTTGAGATTC GTCATAAGCT TTAA
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Protein sequence | MSTPENTLVT PNTSDTIPTA SAAKRYDIVV TCADGLEAPL QTELSHMDIS HELKSTGRIA VNATLEQIYK ICLWSRVASR VLLPIKKRNI NKEYDVAEQL NGLARTVDWT EWFELDNTFA IRMSVDKRVQ VSQQFAMLRI KDAIADTFSE KLDARPDVDS NNPDFPIYAT VNEKQAEIFL DLSGTSLHRR GYRVAMTDAP LKENLAAGLL YTVGWHKTKN SYSALIDPMC GSGTFIIEAL LMHCDYPVGI DKAESQFGFY NWQEHDSELW QQCVVQAQER FHNGLQKAAA GKLPTILGFD ADAGAIKAVH KNLIAAGLIE LIPHLTLEQR PLSQLKIALA KPLLDRKLKR PLVITNPPYG ERLGESDFIK PLYQGLGLTL QEIFAKQKYQ PMLGLLAAHV EQADVLPIED PQTLRCHNGA ITVYFRHGQL IRKEGESLIT RFEKTEIKVD EAQDFVNRLQ KNVNHLKKLA AKEDVTNLRV YDADLPDYKV AIDVYGDYVH VQEWAPPKSI PPETARKRFN LALMGIREVF GINREQIFIK TRARQVGNTQ YGNPEASAQS KESKNAPEPK KDNRNRYKGN KFQQAREEAK RQEAQRLAQK KRKMHVVQED GAYFYVNFTD YLDTGLFIDH RNMRSMIRSA SRGADVLNLF AYTCTASVHA ALGGAKSVTS VDLSQNYLDW GKQNFALNGL DVTTSRYQFI ASDIFDWIKD NTDQFDVIFI DPPTFSNSKK FQGTFDVQRD HTALINRAMN RLANGGVIYF SNNFTKFELD EELYDRYEVT EITSETIGFD FNPKKPIHHS FEIRHKL
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